Return to main results Retrieve Phyre Job Id

Job DescriptionQ64010
Confidence99.55%DateWed Jul 10 14:42:12 BST 2013
Rank231Aligned Residues55
% Identity33%Templatec2k6dA_
PDB info PDB header:sh3 domain/ubiquitinChain: A: PDB Molecule:sh3 domain-containing kinase-binding protein 1; PDBTitle: cin85 sh3-c domain in complex with ubiquitin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250.........260.........270.. .......280.........290.....
Predicted Secondary structure 


















..






Query SS confidence 































. .






















Query Sequence  RVIQKRVPNAYDKTALALEVGELVKVTKINVS. . GQWEGECNGKRGHFPFTHVRLLD
Query Conservation           
    



  



 
      ..


 
   
  
 

 



 
 
Alig confidence 































..






















Template Conservation     

 

      



  

 
 
         
      
  
 

  


 
 
Template Sequence  YCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLP
Template Known Secondary structure 
SS





SSB



TT



SSTTTTGGGS

Template Predicted Secondary structure 
























Template SS confidence 
























































   271........280.........290.........300.........310.........320.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D