Return to main results Retrieve Phyre Job Id

Job DescriptionA2A432
Confidence25.17%DateTue Jul 30 13:09:03 BST 2013
Rank212Aligned Residues63
% Identity13%Templated2dk5a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain RPO3F domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   802.......810..... ....820.........830.........840.........850.........
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Query Sequence  VSLFQTMVLLMFNE. . GEEFSLEEIKHATGIEDGELRRTLQSLACGKARVLAKNPKGKDI
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Template Sequence  SDNQEKLVYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESKK. . . LIKAVKSVAA
Template Known Secondary structure  S
SS
TT
TT

TT...S

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   18.20.........30.........40.........50.........60.... .....70....
 
   860.......
Predicted Secondary structure 



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Query Sequence  EDGDKFIC
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Template Sequence  SKKKVYML
Template Known Secondary structure  SS

Template Predicted Secondary structure 

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   75....80..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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