Return to main results Retrieve Phyre Job Id

Job DescriptionA2A432
Confidence23.34%DateTue Jul 30 13:09:03 BST 2013
Rank225Aligned Residues62
% Identity15%Templated1w7pd2
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Vacuolar sorting protein domain
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   907..910.........920.........930.... .....940.........950.........960.....
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Query Sequence  IDAAIVRIMKMRKTLSHNLLVSEVYNQL. KFPVKPADLKKRIESLIDRDYMERDKENPNQ
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Template Sequence  VKEKLVDLIGDNPGSDLLRLTQILSSNNSKSNWTLGILMEVLQNCVDEGDLLIDKQLSGI
Template Known Secondary structure  TTSTT

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   495....500.........510.........520.........530.........540.........550....
 
   966..
Predicted Secondary structure 
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Query Sequence  YNY
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Template Sequence  YYY
Template Known Secondary structure 
Template Predicted Secondary structure 
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   555..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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