Job Description A2A432 Confidence 39.18% Date Tue Jul 30 13:09:03 BST 2013 Rank 169 Aligned Residues 149 % Identity 19% Template d1nkta2 SCOP info Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Resolution 2.60

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		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.													.	.	.	.
Query SS confidence																																									.	.	.	.	.													.	.	.	.
Query Sequence		V	I	K	N	F	K	D	K	P	K	L	P	E	N	Y	T	D	E	T	W	Q	K	L	K	E	A	V	E	A	I	Q	N	S	T	S	I	K	Y	N	.	.	.	.	.	L	E	E	L	Y	Q	A	V	E	N	L	C	.	.	.	.
Query Conservation																																									.	.	.	.	.													.	.	.	.
Alig confidence																																									.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		V	I	Y	A	E	R	R	R	I	L	E	G	E	N	L	K	D	Q	A	L	D	M	V	R	D	V	I	T	A	Y	V	D	G	A	T	G	E	G	Y	A	E	D	W	D	L	D	A	L	W	T	A	L	K	T	L	Y	P	V	G	I
Template Known Secondary structure												T	T																						T	T	S	S	S		S	S		S													S				S
Template Predicted Secondary structure
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
					306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340				.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																				.	.	.
Query SS confidence		.	.	.																																				.	.	.
Query Sequence		.	.	.	S	H	K	I	S	A	N	L	Y	K	Q	L	R	Q	I	C	E	D	H	I	K	A	Q	I	H	Q	F	R	E	D	S	L	D	S	V	.	.	.	L	F	L	K	K	I	D	R	C	W	Q	N	H	C	R	Q	M	I	M
Query Conservation		.	.	.																																				.	.	.
Alig confidence		.	.	.																																				.	.	.
Template Conservation
Template Sequence		T	A	D	S	L	T	L	L	E	A	L	L	K	D	A	E	R	A	Y	A	A	R	E	A	E	L	E	E	I	A	G	E	G	A	M	R	Q	L	E	R	N	V	L	L	N	V	I	D	R	K	W	R	E	H	L	Y	E	M	D	Y
Template Known Secondary structure			T	T	T	T																											T	T
Template Predicted Secondary structure
Template SS confidence
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	S	I	F	L	F	L	D	R	T	Y	V	L	Q	N	S	M	L	P	S	I	W	D	M	G	L	E	L	F	R	A	H	I	I	S	D	Q	K	V	Q	T	K	T	I	D	G	I	L	L
Query Conservation
Alig confidence									.	.									.																		.	.	.
Template Conservation									.	.									.																		.	.	.
Template Sequence		L	K	E	G	I	G	L	.	.	R	A	M	A	Q	R	D	P	.	L	V	E	Y	Q	R	E	G	Y	D	M	F	M	A	M	L	D	.	.	.	G	M	K	E	E	S	V	G	F	L	F	N
Template Known Secondary structure							G	G	.	.	G		B	T	T	B			.																		.	.	.
Template Predicted Secondary structure									.	.									.																		.	.	.
Template SS confidence
		789	790	.	.	.	.	.			.	.	.	.	800	.	.	.		.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820				.	.	.	.	.	.	.	.	.	830	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D