Job Description A2A432 Confidence 100.00% Date Tue Jul 30 13:09:03 BST 2013 Rank 9 Aligned Residues 336 % Identity 28% Template d1ldja2 SCOP info alpha-alpha superhelix Cullin repeat-like Cullin repeat Resolution 3.00 Model Dimensions (Å) X:112.205 Y:60.739 Z:38.031

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		T	D	E	T	W	Q	K	L	K	E	A	V	E	A	I	Q	N	S	T	S	I	K	Y	N	.	L	E	E	L	Y	Q	A	V	E	N	L	C	S	H	K	I	S	A	N	L	Y	K	Q	L	R	Q	I	C	E	D	H	I	K	A	Q
Query Conservation																										.
Alig confidence																										.														.
Template Conservation																																								.
Template Sequence		L	D	Q	I	W	D	D	L	R	A	G	I	Q	Q	V	Y	T	R	Q	S	M	A	K	S	R	Y	M	E	L	Y	T	H	V	Y	N	Y	C	T	.	S	V	G	L	E	L	Y	K	R	L	K	E	F	L	K	N	Y	L	T	N	L
Template Known Secondary structure																	T	T																				T		.			T	T
Template Predicted Secondary structure																																								.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	Q	F	R	E	D	S	L	D	S	V	L	F	L	K	K	I	D	R	C	W	Q	N	H	C	R	Q	M	I	M	I	R	S	I	F	L	F	L	D	R	T	Y	V	L	Q	N	S	M	L	P	S	I	W	D	M	G	L	E	L
Query Conservation
Alig confidence													.	.																																					.	.
Template Conservation													.	.																																					.	.
Template Sequence		L	K	D	G	E	D	L	M	D	E	S	.	.	V	L	K	F	Y	T	Q	Q	W	E	D	Y	R	F	S	S	K	V	L	N	G	I	C	A	Y	L	N	R	H	W	V	R	R	E	C	Y	.	.	E	I	Y	S	L	A	L	V	T
Template Known Secondary structure				T	T		S		T	T	T	T	.	.																							T							S	S	S					.	.									T
Template Predicted Secondary structure													.	.																																					.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	R	A	H	I	I	S	D	Q	K	V	Q	T	K	T	I	D	G	I	L	L	L	I	E	R	E	R	N	G	E	A	I	D	R	S	L	L	R	S	L	L	S	M	L	S	D	L	Q	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		W	R	D	C	L	F	.	.	R	P	L	N	K	Q	V	T	N	A	V	L	K	L	I	E	K	E	R	N	G	E	T	I	N	T	R	L	I	S	G	V	V	Q	S	Y	V	E	L	G	L	N	E	D	D	A	F	A	K	G	P	T
Template Known Secondary structure		T					T	.	.	T	T	T	T	T											T	T	T	S			T	T			T													T	S			S	S	S	S	S		S	S
Template Predicted Secondary structure								.	.
Template SS confidence
		167	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
				437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	I	Y	Q	D	S	F	E	Q	Q	F	L	Q	E	T	N	R	L	Y	A	A	E	G	Q	K	L	M	Q	E	R	E	V	P	E	Y	L	H	H	V	N	K	R	L	E	E	E	A	D	R	L	I	T	Y	L	D	Q	T	T	Q
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		L	T	V	Y	K	E	S	F	E	S	Q	F	L	A	D	T	E	R	F	Y	T	R	E	S	T	E	F	L	Q	Q	N	P	V	T	E	Y	M	K	K	A	E	A	R	L	L	E	E	Q	R	R	V	Q	V	Y	L	H	E	S	T	Q
Template Known Secondary structure									T																							S		T	T	S	S														T	T	T	T	T	T		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	L	I	A	S	V	E	K	Q	L	L	G	E	H	L	T	A	I	L	Q	K	G	L	N	S	L	L	D	E	N	R	I	Q	D	L	S	L	L	Y	Q	L	F	S	R	V	R	G	G	V	Q	V	L	L	Q	Q	W	I	E	Y
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		D	E	L	A	R	K	C	E	Q	V	L	I	E	K	H	L	E	.	I	F	H	T	E	F	Q	N	L	L	D	A	D	K	N	E	D	L	G	R	M	Y	N	L	V	S	R	I	Q	D	G	L	G	E	L	K	K	L	L	E	T	H
Template Known Secondary structure													S	S	S	S	S		.												S			T	T												S	T	T
Template Predicted Secondary structure																			.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570						.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		I	K	A	F	G	S	T	I	V	I	N	P	E	K	D	K	.	.	.	.	.	T	M	V	Q	E	L	L	D	F	K	D	K	V	D	H	I	I	D	T	C	F	L	K	N	E	K	F	I	N	A	M	K	E	A	F	E	T	F	I
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.
Template Conservation
Template Sequence		I	H	N	Q	G	L	A	A	I	E	K	C	G	E	A	A	L	N	D	P	K	M	Y	V	Q	T	V	L	D	V	H	K	K	Y	N	A	L	V	M	S	A	F	N	N	D	A	G	F	V	A	A	L	D	K	A	C	G	R	F	I
Template Known Secondary structure														T	T	S	G	G	G																						T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	N	A
Template Known Secondary structure			S	S	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D