Return to main results Retrieve Phyre Job Id

Job DescriptionA2A432
Confidence21.66%DateTue Jul 30 13:09:03 BST 2013
Rank239Aligned Residues22
% Identity18%Templated1l0oc_
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   820.........830.........840.
Predicted Secondary structure 



Query SS confidence 





















Query Sequence  SLEEIKHATGIEDGELRRTLQS
Query Conservation 
  

   
 
    
   
 
Alig confidence 





















Template Conservation 
 



  
 
  


  

 
Template Sequence  TVTEIADHLGISPEDVVLAQEA
Template Known Secondary structure 
TS
Template Predicted Secondary structure 



Template SS confidence 





















   134.....140.........150.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D