 |
| Job Description | A2A432 | | Confidence | 38.02% | Date | Tue Jul 30 13:09:03 BST 2013 |
| Rank | 172 | Aligned Residues | 35 |
| % Identity | 20% | Template | d1ku3a_ |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| Sigma4 domain
|
| Resolution | 1.80 |
|
|   |   |
806 | . | . | . | 810 | . | . | . | |
|
. | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | T | M | V | L | L | M | F | . |
. |
N | E | G | E | E | F | S | L | E | E | I | K | H | A | T | G | I | E | D | G | E | L | R | R | T | L | Q |
| Query Conservation |   |
|   |   |
|
|
|
|
| . | . |
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|   |   |   |   |
| Template Sequence |   |
A | M | V | L | K | M | R | K | G | L | I | D | G | R | E | H | T | L | E | E | V | G | A | Y | F | G | V | T | R | E | R | I | R | Q | I | E | N |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | T | T | S | S |
|
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
381 | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|