 |
| Job Description | A2A432 | | Confidence | 25.54% | Date | Tue Jul 30 13:09:03 BST 2013 |
| Rank | 210 | Aligned Residues | 47 |
| % Identity | 17% | Template | c3eqxB_ |
| PDB info |
PDB header:dna binding protein | Chain: B: PDB Molecule:fic domain containing transcriptional regulator; |
PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution
|
| Resolution | 1.60 Å |
|
|   |   |
809 | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | L | L | M | F | N | E | G | E | E | F | S | L | E | E | I | K | H | A | T | G | I | E | D | G | E | L | R | R | T | L | Q | S | L | A | C | G | K | A | R | V | L | A | K | N | P | K | G | K |
| Query Conservation |   |
|
|
|
|
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   | . | . |   |   |
|   |
|   |   |   |   |   |
|
|
| Template Sequence |   |
L | V | Q | V | I | F | E | Q | P | Y | C | R | I | Q | N | L | V | E | S | G | L | A | K | R | Q | T | A | S | V | Y | L | K | Q | L | C | . |
. |
D | I | G | V | L | E | E | V | Q | S | G | K |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| S |  |  |
|  |  |  |  |  |  | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |  | T | T | S |
|  |  |  |  |  | T | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | |
|
. | . | . | . | 340 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|