Job Description A2A432 Confidence 23.13% Date Tue Jul 30 13:09:03 BST 2013 Rank 226 Aligned Residues 86 % Identity 20% Template c3cuqA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex Resolution 2.61 Å

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		755	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.					.	.	.	.	.	810
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		P	P	E	M	V	K	L	Q	E	I	F	K	T	F	Y	L	G	K	H	S	G	R	K	L	Q	W	Q	S	T	L	G	H	C	V	L	K	A	E	F	K	E	G	K	K	E	L	Q	V	S	L	.	.	.	.	F	Q	T	M	V	L
Query Conservation																																																				.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	D	D	L	I	R	A	I	K	K	L	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	T	G	F	G	I	I	P	V	G	G	T	Y	L	I	Q	S	V	P	A	E	L	N	M	D	H	T	V	V	L
Template Known Secondary structure													G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	T	T							T	T							S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.																	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		811	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	F	N	E	G	E	E	F	S	L	E	E	I	K	H	A	T	G	I	E	D	G	E	L	R	R	T	L	Q	S	L	A	C	G	K	A	R	V	L	A	K	N	P	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	A	E	K	N	G	Y	V	T	V	S	E	I	K	A	S	L	K	W	E	T	E	R	A	R	Q	V	L	E	H	L	L	K	E	G	L	A	W	L	D	L	Q	A	P	G
Template Known Secondary structure					T	T	T	S												T																	T	S					S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D