Return to main results Retrieve Phyre Job Id

Job DescriptionA2A432
Confidence89.31%DateTue Jul 30 13:09:03 BST 2013
Rank22Aligned Residues58
% Identity14%Templatec3cuoB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav; PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   807..810.........820.........830.........840.........850.........860......
Predicted Secondary structure 

























Query SS confidence 



























































Query Sequence  TMVLLMFNEGEEFSLEEIKHATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFI
Query Conservation    





     
  

   
 
    
   
 

   
  

              
 
Alig confidence 




































..













....


Template Conservation    

  
         


  
 

  


 

  
 ..  


     
   .... 
 
Template Sequence  LLILCMLSGSPGTSAGELTRITGLSASATSQHLARMR. . DEGLIDSQRDAQRI. . . . LYS
Template Known Secondary structure  TT
S



..TS
SS
....
Template Predicted Secondary structure 







..




....
Template SS confidence 



























































   27..30.........40.........50.........60... ......70....... ..80
 
   867..870
Predicted Secondary structure 


Query SS confidence 



Query Sequence  CNDD
Query Conservation   
  
Alig confidence 



Template Conservation 
   
Template Sequence  IKNE
Template Known Secondary structure 

Template Predicted Secondary structure 
Template SS confidence 



   81...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D