Job Description A2A432 Confidence 52.06% Date Tue Jul 30 13:09:03 BST 2013 Rank 131 Aligned Residues 92 % Identity 17% Template c2zmeB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:vacuolar protein-sorting-associated protein 36; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex Resolution 2.90 Å

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		755	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.						.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		P	P	E	M	V	K	L	Q	E	I	F	K	T	F	Y	L	G	K	H	S	G	R	K	L	Q	W	Q	S	T	L	G	H	C	V	L	K	A	E	F	K	E	G	K	K	E	L	Q	V	S	L	.	.	.	.	.	F	Q	T	M	V
Query Conservation																																																				.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	D	L	V	N	A	C	K	M	L	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	L	P	L	R	L	R	V	F	D	S	G	V	M	V	I	E	L	Q	S	H	K	E	E	E	M	V	A	S	A
Template Known Secondary structure											T	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T		S							T	T								S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.																	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	M	F	N	E	G	E	E	F	S	L	E	E	I	K	H	A	T	G	I	E	D	G	E	L	R	R	T	L	Q	S	L	A	C	G	K	A	R	V	L	A	K	N	P	K	G	K	D	I	E	D	G	D	K	F	I	C	N
Query Conservation
Alig confidence																																				.	.												.	.	.	.
Template Conservation																																				.	.												.	.	.	.
Template Sequence		L	E	T	V	S	E	K	G	S	L	T	S	E	E	F	A	K	L	V	G	M	S	V	L	L	A	K	E	R	L	L	L	A	E	.	.	K	M	G	H	L	C	R	D	D	S	V	.	.	.	.	E	G	L	R	F	Y	P	N
Template Known Secondary structure									S		B										T															.	.			T	S							T	.	.	.	.	T
Template Predicted Secondary structure																																				.	.												.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.					.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D