Job Description A2A432 Confidence 95.54% Date Tue Jul 30 13:09:03 BST 2013 Rank 17 Aligned Residues 138 % Identity 14% Template c2xv4S_ PDB info PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase iii subunit rpc3; PDBTitle: structure of human rpc62 (partial) Resolution 2.95 Å Model Dimensions (Å) X:70.357 Y:46.086 Z:34.919

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		807	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	V	L	L	M	F	N	E	G	E	E	F	S	L	E	E	I	K	H	A	T	G	I	E	D	G	E	L	R	R	T	L	Q	S	L	A	C	G	K	A	R	V	L	A	K	N	P	K	G	K	D	I	E	D	G	D	K	F	I
Query Conservation
Alig confidence																																							.	.											.	.	.	.	.
Template Conservation																																							.	.											.	.	.	.	.
Template Sequence		E	K	I	G	V	H	L	I	R	T	G	S	Q	P	L	R	V	I	A	H	D	T	G	T	S	L	D	Q	V	K	K	A	L	C	V	L	V	.	.	Q	H	N	L	V	S	Y	Q	V	H	.	.	.	.	.	K	R	G	V	V	E
Template Known Secondary structure											S		S											T															.	.		T	T	S							.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																							.	.											.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.
		867	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	N	D	D	F	K	H	K	L	F	R	I	K	I	N	Q	I	Q	M	K	E	T	V	E	E	Q	A	S	T	T	E	R	V	F	Q	D	R	Q	Y	Q	I	D	A	A	I	V	R	I	M	K	M	R	K	T	L	S	H	N	L	L
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	E	A	Q	C	S	R	V	L	R	M	L	R	Y	P	R	Y	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	K	T	L	Y	S	D	T	G	E	L	I	V	E	E	L	L	L	N	G	K	L	T	M	S	A	V
Template Known Secondary structure											G	G	G	G							.	.	.	.	.	.	.	.	.	.	.	.	.						S																S	B
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.														.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		927	.	.	930	.	.	.	.		.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		V	S	E	V	Y	N	Q	L	.	K	F	P	V	K	P	A	D	L	K	K	R	I	E	S	L	I	D	R	D	Y	M	E	R	D	K	E	N	P	N
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		V	K	K	V	A	D	R	L	T	E	T	T	M	D	Y	A	E	V	S	N	T	F	V	R	L	A	D	T	H	F	V	Q	R	C	P	S	I	P	D
Template Known Secondary structure											T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D