Job Description A2A432 Confidence 39.46% Date Tue Jul 30 13:09:03 BST 2013 Rank 167 Aligned Residues 83 % Identity 18% Template c2l3wA_ PDB info PDB header:photosynthesis Chain: A: PDB Molecule:phycobilisome rod linker polypeptide; PDBTitle: solution nmr structure of the pbs linker domain of phycobilisome rod2 linker polypeptide from synechococcus elongatus, northeast structural3 genomics consortium target snr168a Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	D	S	F	E	Q	Q	F	L	Q	E	T	N	R	L	Y	A	A	E	G	Q	K	L	M	Q	E	R	E	V	P	E	Y	L	H	H	V	N	K	R	L	E	E	E	A	D	R	L	I	T	Y	L	D	Q	T	T	Q	K	S	L
Query Conservation
Alig confidence																																										.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		Y	R	Q	V	L	G	N	D	Y	V	M	S	T	E	R	L	T	S	A	E	S	L	L	R	G	G	E	I	S	V	R	D	F	V	R	A	V	A	L	S	.	.	.	.	E	L	Y	R	E	K	F	F	H	N	N	A	H	N	R	F
Template Known Secondary structure							S	S	S				S	S		T	T									T	T		S													.	.	.	.								T	T	S	S
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		498	.	500	.	.	.	.	.											.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	S	V	E	K	Q	L	.	.	.	.	.	.	.	.	.	.	L	G	E	H	L	T	A	I	L	Q	K	G	L	N	S	L	L	D	E
Query Conservation										.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	L	N	F	K	H	L	L	G	R	A	P	Y	D	Q	A	E	V	A	A	H	A	A	T	Y	H	S	H	G	Y	D	A	D	I	N	S
Template Known Secondary structure										T	S																			T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D