Job Description A2A432 Confidence 24.87% Date Tue Jul 30 13:09:03 BST 2013 Rank 214 Aligned Residues 83 % Identity 14% Template c2l06A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:phycobilisome lcm core-membrane linker polypeptide; PDBTitle: solution nmr structure of the pbs linker polypeptide domain (fragment2 254-400) of phycobilisome linker protein apce from synechocystis sp.3 pcc 6803. northeast structural genomics consortium target sgr209c Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		438	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		Y	Q	D	S	F	E	Q	Q	F	L	Q	.	E	T	N	R	L	Y	A	A	E	G	Q	K	L	M	Q	E	R	E	V	P	E	Y	L	H	H	V	N	K	R	L	E	E	E	A	D	R	L	I	T	Y	L	D	Q	T	T	Q	K	S
Query Conservation													.
Alig confidence													.																														.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		Y	R	Q	I	F	E	R	D	I	T	K	A	Y	S	Q	S	I	S	Y	L	E	S	Q	V	R	N	G	D	I	S	M	K	E	F	V	R	R	L	A	K	S	.	.	.	.	P	L	Y	R	K	Q	F	F	E	P	F	I	N	S	R
Template Known Secondary structure						S	S	S				T	T	S		T												T		S											T	S	.	.	.	.							T	T	T	T	S
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		497	.	.	500	.	.	.	.	.											.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	A	S	V	E	K	Q	L	.	.	.	.	.	.	.	.	.	.	L	G	E	H	L	T	A	I	L	Q	K	G	L	N	S	L	L	D	E
Query Conservation											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	E	L	A	F	R	H	I	L	G	R	G	P	S	S	R	E	E	V	Q	K	Y	F	S	I	V	S	S	G	G	L	P	A	L	V	D	A
Template Known Secondary structure											T	S	S				S														T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D