Job Description A2A432 Confidence 37.09% Date Tue Jul 30 13:09:03 BST 2013 Rank 175 Aligned Residues 89 % Identity 16% Template c2kkvA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: solution nmr structure of an integrase domain from protein spa42882 from salmonella enterica, northeast structural genomics consortium3 target slr105h Resolution UNK

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		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	S	I	K	Y	N	L	E	E	L	Y	Q	A	V	E	N	L	C	S	H	K	I	S	A	N	L	Y	K	Q	L	R	Q	I	C	E	D	H	I	K	A	Q	I	H	Q	F	R	E	D	S	L	D	S	V	L	F	L	K	K	I
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		E	N	S	G	A	Y	T	F	E	T	I	A	R	E	W	H	E	S	N	K	.	R	W	S	E	D	H	R	S	R	V	L	R	Y	L	E	L	Y	I	F	P	H	I	G	S	S	D	I	R	Q	L	K	T	S	H	L	L	A	P	I
Template Known Secondary structure			S					S										T	T			.	S	S																	S	S	S	S	T	T	S		T	T				S	G	G	G
Template Predicted Secondary structure																						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		347	.	.	350	.	.						.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.															.
Query SS confidence								.	.	.	.	.															.
Query Sequence		D	R	C	W	Q	N	.	.	.	.	.	H	C	R	Q	M	I	M	I	R	S	I	F	L	F	.	L	D	R	T	Y	V	L	Q	N	S
Query Conservation								.	.	.	.	.															.
Alig confidence								.	.	.	.	.															.
Template Conservation
Template Sequence		K	E	V	D	T	S	G	K	H	D	V	A	Q	R	L	Q	Q	R	V	T	A	I	M	R	Y	A	V	Q	N	D	Y	I	D	S	N	P
Template Known Secondary structure							T	T	T																					T	T	S	S		S		S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D