Return to main results Retrieve Phyre Job Id

Job DescriptionA2A432
Confidence73.63%DateTue Jul 30 13:09:03 BST 2013
Rank106Aligned Residues137
% Identity14%Templatec2fsgA_
PDB info PDB header:protein transportChain: A: PDB Molecule:preprotein translocase seca subunit; PDBTitle: complex seca:atp from escherichia coli
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290.........300.........310.........320....
Predicted Secondary structure 










Query SS confidence 



























































Query Sequence  LPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSHKISANLYKQLRQICEDH
Query Conservation           
  
  

  
        
 
 

  
  
   
    

  
       
Alig confidence 











.














































Template Conservation              .  
   
                                       
Template Sequence  IPPQSLEEXWDI. PGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERILAQSIEVYQRK
Template Known Secondary structure  S
TT

GGG

.





SS

Template Predicted Secondary structure 










.








Template SS confidence 



























































   692.......700... ......710.........720.........730.........740.........750
 
   325....330.........340.........350.........360.........370.........380....
Predicted Secondary structure 










Query SS confidence 



























































Query Sequence  IKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDM
Query Conservation                    
      
         
  

 



 
         
   
Alig confidence 















.






















..









.






Template Conservation               
  . 
   
  
  

     
   
..  
     

.  

  
Template Sequence  EEVVGAEXXRHFEKGV. XLQTLDSLWKEHLAAXDYLRQGI. . HLRGYAQKDP. KQEYKRE
Template Known Secondary structure 
.TT..TTSS
SSS
T.TT
Template Predicted Secondary structure 

...


.
Template SS confidence 



























































   751........760...... ...770.........780......... 790......... 800......
 
   385....390.........400.........
Predicted Secondary structure 



Query SS confidence 
























Query Sequence  GLELFRAHIISDQKVQTKTIDGILL
Query Conservation 

 


                 
 
Alig confidence 









...











Template Conservation      
     ...            
Template Sequence  SFSXFAAXLE. . . SLKYEVISTLSK
Template Known Secondary structure  ...
Template Predicted Secondary structure  ...
Template SS confidence 
























   807..810...... ...820........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D