Job Description A2A432 Confidence 39.86% Date Tue Jul 30 13:09:03 BST 2013 Rank 163 Aligned Residues 64 % Identity 8% Template c1z05A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, rok family; PDBTitle: crystal structure of the rok family transcriptional regulator, homolog2 of e.coli mlc protein. Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		806	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.				.	860	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		Q	T	M	V	L	L	M	F	N	E	G	E	E	F	S	L	E	E	I	K	H	A	T	G	I	E	D	G	E	L	R	R	T	L	Q	S	L	A	C	G	K	A	R	V	L	A	K	N	P	K	G	K	D	.	.	.	I	E	D	G
Query Conservation																																																							.	.	.
Alig confidence																																								.	.														.	.	.
Template Conservation																																								.	.
Template Sequence		A	G	R	V	Y	K	L	I	D	Q	K	G	P	I	S	R	I	D	L	S	K	E	S	E	L	A	P	A	S	I	T	K	I	T	R	E	L	I	.	.	D	A	H	L	I	H	E	T	T	V	Q	E	A	I	S	R	G	R	P	A
Template Known Secondary structure														S	B										T															.	.		T	T	S													T	S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		863	.	.	.	.	.	.	870	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	F	I	C	N	D	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	L	Q	T	N	N	L	G
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D