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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank165Aligned Residues249
% Identity22%Templatec4dc2A_
PDB info PDB header:transferase/transferase substrateChain: A: PDB Molecule:protein kinase c iota type; PDBTitle: structure of pkc in complex with a substrate peptide from par-3
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   246...250.........260.........270. ........280.........290.........300. ..
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Query Sequence  IDRNSIALERRLGTGCFGDVWLGTWN. CSTKVAVKTLKPGTMSPKAFLEEAQIMKLL. RH
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNIDWVQTEKHVFEQASNH
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GGG
SSTTTTGGGT


TT
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   239240.........250.........260.........270.........280.........290........
 
   304.....310..... ....320.........330.........340.........350.........360..
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Query Sequence  DKLVQLYAVVSE. EPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAAQVAEGMAYME
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Template Sequence  PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR. . KLPEEHARFYSAEISLALNYLH
Template Known Secondary structure  TTB


SS

TT
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   303......310.........320.........330........ .340.........350.........360
 
   363......370.........380.........390.........400.........410.........420..
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Query Sequence  RMNYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPEAALFGR
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Template Sequence  ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE. GLRPGDTTSTFCGTPNYIAPEILRGED
Template Known Secondary structure  TT
B




GGG
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GGG

TT

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   361........370.........380.........390.. .......400.........410.........
 
   423......430.........440.........450. ........460.........470.........480
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Query Sequence  FTVKSDVWSFGILLTELITKGRVPYPGMN. . NREVLEQVEHGYHMPCPPGCPASLYEVME
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Template Sequence  YGFSVDWWALGVLMFEMMA. GRSPFDIVGSNTEDYLFQVILEKQIRIPRSLSVKAASVLK
Template Known Secondary structure  B
T.SS
SSTTTT








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   420.........430........ .440.........450.........460.........470........
 
   481........490. .......
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Query Sequence  QAWRLDPEERP. . . . . . TFEYLQS
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Template Sequence  SFLNKDPKERLGCHPQTGFADIQG
Template Known Secondary structure  T
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TTTSTT
STTT
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   485....490.........500........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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