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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank271Aligned Residues248
% Identity25%Templatec4b99A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 7; PDBTitle: crystal structure of mapk7 (erk5) with inhibitor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260.........270. ........280......... 290........
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Query Sequence  AWEIDRNSIALERRLGTGCFGDVWLGTWN. CSTKVAVKTLKPGTMSPK. . . AFLEEAQIM
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Template Sequence  TFDVGD. EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKIL
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   48.50... ......60.........70.........80.........90.........100......
 
   299300.........310...... ...320.........330.........340.........350.
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Query Sequence  KLLRHDKLVQLYAVVSEE. . . . . . . PIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMA
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Template Sequence  KHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP. . . LTLEHVRYFL
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   107..110.........120.........130.........140.........150... ......160...
 
   352.......360.........370.........380.........390.........400.........410.
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Query Sequence  AQVAEGMAYMERMNYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIK
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Template Sequence  YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLQYFMTEYVATRWY. . .
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   164.....170.........180.........190.........200.........210.........220
 
   412.......420.........430.........440.........450.........460.........
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Query Sequence  WTAPEAALFGRFTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQVEHGYHMPCPP. .
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Template Sequence  RAPELMLSLHEYTQAIDLWSVGCIFGEMLA. RRQLFPGKNYVHQLQLIMMVLGTPSPAVI
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   228.230.........240.........250....... ..260.........270.........280......
 
   470.........480.........490........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . GCPASLYEVMEQAWRLDPEERPTFEYLQS
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Template Sequence  QRVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR
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   287..290.........300.........310.........320.........330........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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