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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank251Aligned Residues236
% Identity25%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   249250.........260.........270. ........280.. .......290.........300. .
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Query Sequence  NSIALERRLGTGCFGDVWLGTWN. CSTKVAVKTLK. . . . PGTMSPKAFLEEAQIMKLL. R
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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   353......360.........370.........380.........390.........400.........410..
 
   303......310..... ....320.........330.........340.........350.........360.
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Query Sequence  HDKLVQLYAVVSE. EPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAAQVAEGMAYM
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR. . RFDEARARFYAAEIISALMFL
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   413......420.........430.........440......... 450.........460.........470
 
   362.......370.........380.........390.........400.........410.........420.
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Query Sequence  ERMNYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPEAALFG
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Template Sequence  HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK. . . . . . . . . . EGICGTPDYIAPEILQEM
Template Known Secondary structure  TT
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GGG
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GGG

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   471........480.........490.........500.. .......510.........520
 
   422.......430.........440.........450.........460.........470.........480.
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Query Sequence  RFTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQVEHGYHMPCPPGCPASLYEVMEQ
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Template Sequence  LYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILND. EVVYPTWLHEDATGILKS
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   530.........540......... 550.........560......... 570.........580.......
 
   482.......490.. ......
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Query Sequence  AWRLDPEERPT. . . . . . FEYLQS
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Template Sequence  FMTKNPTMRLGSLTQGGEHAILR
Template Known Secondary structure  T
SSGGGSTTSGGGT
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   588.590.........600.........610
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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