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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank262Aligned Residues256
% Identity31%Templatec3s95A_
PDB info PDB header:transferase/antibioticChain: A: PDB Molecule:lim domain kinase 1; PDBTitle: crystal structure of the human limk1 kinase domain in complex with2 staurosporine
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260.........270 .........280....... ..290.........
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Query Sequence  DAWEIDRNSIALERRLGTGCFGDVWLGTW. NCSTKVAVKTLKPGTMS. PKAFLEEAQIMK
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Template Sequence  PHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMR
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T
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   330.........340.........350.........360.........370.........380.........
 
   300.........310..... ....320.........330.........340.........350........
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Query Sequence  LLRHDKLVQLYAVVSE. EPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAAQVAEGM
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Template Sequence  CLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS. QYPWSQRVSFAKDIASGM
Template Known Secondary structure  T


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TT
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   390.........400.........410.........420.........430 .........440........
 
   359360.........370.........380.........390.........400.........410........
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Query Sequence  AYMERMNYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPEAA
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Template Sequence  AYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLAR. . . . . . . LMVYTVVGNPYWMAPEMI
Template Known Secondary structure  TT
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TT
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   449450.........460.........470.........480... ......490.........500.
 
   419420.........430.........440.........450........ .460.........470......
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Query Sequence  LFGRFTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQ. . VEHGYHMPCPPGCPASLY
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Template Sequence  NGRSYDEKVDVFSFGIVLCEIIG. RVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFF
Template Known Secondary structure  TT



T.T

SSTTTS
B
TTSSB
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TT
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   522.......530.........540.... .....550.........560.........570.........580
 
   477..480.........490.........500......
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Query Sequence  EVMEQAWRLDPEERPTFEYLQSFLEDYFTS
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Template Sequence  PITVRCCDLDPEKRPSFVKLEHWLETLRMH
Template Known Secondary structure  T
SSGGGS

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   581........590.........600.........610
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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