Job Description P14234 Confidence 100.00% Date Wed Jul 10 14:36:25 BST 2013 Rank 160 Aligned Residues 241 % Identity 21% Template c3qd2B_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain Resolution 2.81 Å

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		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																										.										.	.
Query SS confidence																										.										.	.
Query Sequence		N	S	I	A	L	E	R	R	L	G	T	G	C	F	G	D	V	W	L	G	T	W	N	C	.	S	T	K	V	A	V	K	T	L	.	.	K	P	G	T	M	S	P	K	A	F	L	E	E	A	Q	I	M	K	L	L	R	H	D	K
Query Conservation																										.										.	.
Alig confidence														.												.										.	.
Template Conservation														.
Template Sequence		T	D	F	E	P	I	Q	C	M	G	R	G	.	F	G	V	V	F	E	A	K	N	K	V	D	D	C	N	Y	A	I	K	R	I	R	L	P	N	R	E	L	A	R	E	K	V	M	R	E	V	K	A	L	A	K	L	E	H	P	G
Template Known Secondary structure														.		S								T	T	T													S	T	T	T													T	S				T	T
Template Predicted Secondary structure														.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.		.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.															.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		L	V	Q	L	Y	A	V	V	S	E	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	I	V	T	E	F	M	C	Y	G	S	L	L	D	F	L	K	D	R	E	G	Q	.	N	L	M	L	P	H	L	V	D	M
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		I	V	R	Y	F	N	A	W	L	E	T	P	P	E	K	W	Q	E	E	M	D	E	P	K	V	Y	L	Y	I	Q	M	Q	L	C	R	K	E	N	L	K	D	W	M	N	R	R	C	S	L	E	D	R	E	H	G	V	C	L	H	I
Template Known Secondary structure		B												S																							S	S								T			S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Q	V	A	E	G	M	A	Y	M	E	R	M	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	G	E	Y	L	I	C	K	I	A	D	F	G	L	A	R	L	I	E	D	N	E	Y	N	P	Q	Q	G	T	K	F	P	I
Query Conservation
Alig confidence																																																								.	.	.	.	.
Template Conservation																																																								.	.	.	.	.
Template Sequence		F	I	Q	I	A	E	A	V	E	F	L	H	S	K	G	L	M	H	R	D	L	K	P	S	N	I	F	F	T	M	D	D	V	V	K	V	G	D	F	G	L	V	T	A	M	D	Q	D	T	H	G	Q	V	T	.	.	.	.	.	K
Template Known Secondary structure															T	T								G	G	G					T	T									T	T					S									.	.	.	.	.	G
Template Predicted Secondary structure																																																								.	.	.	.	.
Template SS confidence
		916	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.						970
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	T	A	P	E	A	A	L	F	G	R	F	T	V	K	S	D	V	W	S	F	G	I	L	L	T	E	L	I	T	K	G	R	V	P	Y	P	G	M	N	N	R	E	V	L	E	Q	V	E	H	G	Y	H	M	P	C	P	P	G
Query Conservation
Alig confidence																																	.						.	.
Template Conservation																																	.						.	.
Template Sequence		L	Y	M	S	P	E	Q	I	H	G	N	N	Y	S	H	K	V	D	I	F	S	L	G	L	I	L	F	E	L	L	Y	.	S	F	S	T	Q	.	.	M	E	R	V	R	I	I	T	D	V	R	N	L	K	F	P	L	L	F	T	Q
Template Known Secondary structure		G	G	S												T																S	.						.	.												T	T
Template Predicted Secondary structure																																	.						.	.
Template SS confidence
		987	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.		.	.	1020	.	.			.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	A	S	L	Y	E	V	M	E	Q	A	W	R	L	D	P	E	E	R	P	T	F	E	Y	L	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	P	Q	E	H	M	M	V	Q	D	M	L	S	P	S	P	T	E	R	P	E	A	T	D	I	I	E
Template Known Secondary structure																S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1044	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D