Job Description P14234 Confidence 99.92% Date Wed Jul 10 14:36:25 BST 2013 Rank 347 Aligned Residues 150 % Identity 23% Template c3ps5A_ PDB info PDB header:hydrolase, signaling protein Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 6; PDBTitle: crystal structure of the full-length human protein tyrosine2 phosphatase shp-1 Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.																					.	.	.
Predicted Secondary structure																															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	F	V	A	L	Y	D	Y	E	A	R	T	G	D	D	L	T	F	T	K	G	E	K	F	H	I	L	N	.	N	T	E	Y	D	W	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	R
Query Conservation																															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	F	L	A	R	P	S	R	K	N	Q	G	D	F	S	L	S	V	R	V	G	D	Q	V	T	H	I	R	I	Q	N	S	G	D	F	Y	D	L	Y	G	G	E	K	F	A	T	L	T	E	L	V	E	Y	Y	T	Q	Q	Q	G
Template Known Secondary structure		T								S	S	S	T	T	S								T	T											S	S				S	S	S	S			B	S	S										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	S	S	G	H	R	G	Y	V	P	S	N	Y	V	A	P	V	D	S	I	Q	A	E	E	W	Y	F	G	K	I	S	R	K	D	A	E	R	Q	L	L	S	S	G	N	P	Q	G	A	F	L	I	R	E	S	E	T	T	K	G
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		V	L	Q	D	R	D	G	T	I	I	H	L	K	Y	P	L	N	C	S	D	P	T	S	E	R	W	Y	H	G	H	M	S	G	G	Q	A	E	T	L	L	Q	A	K	G	.	E	P	W	T	F	L	V	R	E	S	L	S	Q	P	G
Template Known Secondary structure				B		S	S			B						B						S			S	T	T				S															.		T	T								S	S	S	T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		167	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		A	Y	S	L	S	I	R	D	W	D	Q	.	.	.	.	N	R	G	D	H	I	K	H	Y	K	I	R	K	L	D	T	G	G	Y	Y	I	T	T	R	A	Q	F	D	S	I	Q	D	L	V	R	H	Y	M	E	V	N	D
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.														.
Template Conservation																														.
Template Sequence		D	F	V	L	S	V	L	S	D	Q	P	K	A	G	P	G	S	P	L	R	V	T	H	I	K	V	M	C	.	E	G	G	R	Y	T	V	G	G	L	E	T	F	D	S	L	T	D	L	V	E	H	F	K	K	T	G	I
Template Known Secondary structure													S	S	S	T	T	S										B		.	G	G	G		B	B	S	S	S	S			B	S	S											S		B
Template Predicted Secondary structure																														.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D