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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank21Aligned Residues259
% Identity23%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240.........250.........260.........270. ........280..... ...
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Query Sequence  PQTLGLAKDAWEIDRNSIALERRLGTGCFGDVWLGTWN. CSTKVAVKTLKPGT. . . . MSP
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Template Sequence  SQEEGEYFNVPVPPLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDV
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TTGGGT





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   279280.........290.........300.........310.........320.........330........
 
   289290.........300. ........310..... ....320.........330.........340......
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Query Sequence  KAFLEEAQIMKLL. RHDKLVQLYAVVSE. EPIYIVTEFMCYGSLLDFLKDREGQNLMLPH
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Template Sequence  ECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG. . RFKEPH
Template Known Secondary structure  T
TT

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   385....390.........400.........410.........420.........430...... ...440..
 
   347..350.........360.........370.........380.........390.........400......
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Query Sequence  LVDMAAQVAEGMAYMERMNYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGT
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Template Sequence  AVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKF. .
Template Known Secondary structure  TS




STT
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   443......450.........460.........470.........480.........490.........500
 
   407..410.........420.........430.........440.........450.........460......
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Query Sequence  KFPIKWTAPEAALFGRFTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQVEHGYHMP
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Template Sequence  CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEHN. VA
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   502.......510.........520.........530...... ...540.........550....... ..
 
   467..470.........480.........490.. ......
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Query Sequence  CPPGCPASLYEVMEQAWRLDPEERPT. . . . . FEYLQS
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Template Sequence  YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE
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   560.........570.........580.........590......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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