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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank102Aligned Residues249
% Identity27%Templatec3hztA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase 3; PDBTitle: crystal structure of toxoplasma gondii cdpk3, tgme49_105860
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   249250.........260.........270. ........280..... ....290.........300...
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Query Sequence  NSIALERRLGTGCFGDVWLGTWN. CSTKVAVKTLKPGT. . . . MSPKAFLEEAQIMKLLRH
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Template Sequence  DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH
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   74.....80.........90.........100.........110.........120.........130...
 
   304.....310..... ....320.........330.........340.........350.........360..
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Query Sequence  DKLVQLYAVVSE. EPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAAQVAEGMAYME
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Template Sequence  PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ. . KFSEVDAAVIMKQVLSGTTYLH
Template Known Secondary structure  TTB


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   134.....140.........150.........160......... 170.........180.........190.
 
   363......370........ .380.........390.........400.........410.........
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Query Sequence  RMNYIHRDLRAANILV. . . GEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPEAAL
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Template Sequence  KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGT. . . . . . . . . . . AYYIAPEVL
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   192.......200.........210.........220.........230. ........240
 
   420.........430.........440.........450.........460... ......470......
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Query Sequence  FGRFTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQVEHGY. . . HMPCPPGCPASLY
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Template Sequence  RKKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAK
Template Known Secondary structure  TT


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   249250.........260.........270 .........280.........290.........300.......
 
   477..480.........490......... 500.........510.
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Query Sequence  EVMEQAWRLDPEERPTFEYLQSF. . LEDYFTSTEPQY
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Template Sequence  QLVKLMLTYEPSKRISAEEALNHPWIVKFCSQVGKHA
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   308.310.........320.........330.........340....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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