Job Description P14234 Confidence 100.00% Date Wed Jul 10 14:36:25 BST 2013 Rank 248 Aligned Residues 229 % Identity 26% Template c3famA_ PDB info PDB header:transferase Chain: A: PDB Molecule:carbon catabolite-derepressing protein kinase; PDBTitle: crystal structure of the protein kinase domain of yeast amp-2 activated protein kinase snf1 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		254	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure								.														.
Query SS confidence								.														.
Query Sequence		E	R	R	L	G	T	.	G	C	F	G	D	V	W	L	G	T	W	N	C	.	S	T	K	V	A	V	K	T	L	K	P	G	T	M	S	P	K	A	F	L	E	E	A	Q	I	M	K	L	L	R	H	D	K	L	V	Q	L	Y	A
Query Conservation								.														.
Alig confidence								.														.															.
Template Conservation																																					.
Template Sequence		G	A	H	I	G	N	Y	Q	I	V	K	K	V	K	L	A	Y	H	T	T	T	G	Q	K	V	A	L	K	I	I	N	K	K	V	M	.	Q	G	R	I	E	R	E	I	S	Y	L	R	L	L	R	H	P	H	I	I	K	L	Y	D
Template Known Secondary structure				B				B		S										T	T	T											S				.																	T	T	B
Template Predicted Secondary structure																																					.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		312	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	V	S	E	.	E	P	I	Y	I	V	T	E	F	M	C	Y	G	S	L	L	D	F	L	K	D	R	E	G	Q	N	L	M	L	P	H	L	V	D	M	A	A	Q	V	A	E	G	M	A	Y	M	E	R	M	N	Y	I	H	R	D
Query Conservation						.
Alig confidence						.											.													.	.
Template Conservation																	.													.	.
Template Sequence		V	I	K	S	K	D	E	I	I	M	V	I	E	Y	A	.	G	N	E	L	F	D	Y	I	V	Q	R	D	.	.	K	M	S	E	Q	E	A	R	R	F	F	Q	Q	I	I	S	A	V	E	Y	C	H	R	H	K	I	V	H	R	D
Template Known Secondary structure						S	S										.										T	S	S	.	.	S																							T	T
Template Predicted Secondary structure																	.													.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	A	N	I	L	V	G	E	Y	L	I	C	K	I	A	D	F	G	L	A	R	L	I	E	D	N	E	Y	N	P	Q	Q	G	T	K	F	P	I	K	W	T	A	P	E	A	A	L	F	G	R	F	T	V	K	S	D	V	W
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	P	E	N	L	L	L	D	E	H	L	N	V	K	I	A	D	F	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	N	Y	A	A	P	E	V	I	S	G	P	E	V	D	V	W
Template Known Secondary structure			S	G	G	G					T	T	S							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T									T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.																						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	G	I	L	L	T	E	L	I	T	K	G	R	V	P	Y	P	G	M	N	N	R	E	V	L	E	Q	V	E	H	G	Y	H	M	P	C	P	P	G	C	P	A	S	L	Y	E	V	M	E	Q	A	W	R	L	D	P	E	E	R
Query Conservation
Alig confidence													.																					.
Template Conservation													.																					.
Template Sequence		S	C	G	V	I	L	Y	V	M	L	C	.	R	R	L	P	F	D	D	E	S	I	P	V	L	F	K	N	I	S	N	G	.	V	Y	T	L	P	K	F	L	S	P	G	A	A	G	L	I	K	R	M	L	I	V	N	P	L	N	R
Template Known Secondary structure													.	S	S		S	S			S	S											T	.						T	T	S												S		S	S	G	G	G	S
Template Predicted Secondary structure													.																					.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	F	E	Y	L	Q	S	F	L	E	D	Y	F	T	S	T	E	P	Q	Y
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		I	S	I	H	E	I	M	Q	D	.	.	D	W	F	K	V	D	L	P	E	Y
Template Known Secondary structure								T	T		.	.					T	T			G	G
Template Predicted Secondary structure											.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D