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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank261Aligned Residues242
% Identity23%Templatec3enmC_
PDB info PDB header:transferaseChain: C: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 6; PDBTitle: the structure of the map2k mek6 reveals an autoinhibitory dimer
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   246...250.........260.........270. ........280......... 290........ .300.
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Query Sequence  IDRNSIALERRLGTGCFGDVWLGTWN. CSTKVAVKTLKPGTMSPK. . AFLEEAQIM. KLL
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Template Sequence  VKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTV
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STT




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S
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   48.50.........60.........70.........80.........90.........100.......
 
   302.......310..... ....320.........330.... .....340.........350.........
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Query Sequence  RHDKLVQLYAVVSE. EPIYIVTEFMCYGSLLDFL. KDREGQNLMLPHLVDMAAQVAEGMA
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Template Sequence  DCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE
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   108.110.........120.........130.........140.........150.........160.......
 
   360.... .....370.........380.........390.........400.........410........
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Query Sequence  YMERM. NYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPEAA
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Template Sequence  HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISG. . . . . . . . . . YLVDDVKPYXAPERI
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SGGG
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   168.170.........180.........190.........200.. .......210.......
 
   419420. ........430.........440.........450.. .......460.........470.....
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Query Sequence  LFG. RFTVKSDVWSFGILLTELITKGRVPYPGMNN. . REVLEQVEHGYHMPCPPGCPASL
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Template Sequence  NPELNQSVKSDIWSLGITXIELAI. LRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEF
Template Known Secondary structure  S
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   226...230.........240......... 250.........260.........270.........280....
 
   476...480.........490........
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Query Sequence  YEVMEQAWRLDPEERPTFEYLQS
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Template Sequence  VDFTSQCLKKNSKERPTYPELXQ
Template Known Secondary structure  T
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TT
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   288.290.........300.........310
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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