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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank179Aligned Residues245
% Identity20%Templatec2zmcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human mitotic checkpoint kinase mps1 catalytic2 domain apo form
Resolution3.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260.........270.........280......... 290........
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Query Sequence  DAWEIDRNSIALERRLGTGCFGDVWLGTWNCSTKVAVKTLKPGTMSPK. . . AFLEEAQIM
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Template Sequence  ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL
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   516...520.........530.........540.........550.........560.........570.....
 
   299300.. .......310.........320.........330.........340.........350......
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Query Sequence  KLLR. . HDKLVQLYAVVSEEPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAAQVAE
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Template Sequence  NKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK. . SIDPWERKSYWKNMLE
Template Known Secondary structure  GGG
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   576...580.........590.........600.........610....... ..620.........630...
 
   357..360.........370.........380.........390.........400.........410......
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Query Sequence  GMAYMERMNYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPE
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Template Sequence  AVHTIHQHGIVHSDLKPANFLIV. DGMLKLIDFGIA. . . . . . . . NQMDSQVGTVNYMPPE
Template Known Secondary structure  TT






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   634.....640.........650...... ...660........ .670.........680....
 
   417..420 .........430.........440.........450.. .......460.........470...
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Query Sequence  AALF. GRFTVKSDVWSFGILLTELITKGRVPYPGMNN. . REVLEQVEHGYHMPCPPGCPA
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Template Sequence  AIKDMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK
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   694.....700.........710......... 720.........730.........740.........750..
 
   474.....480.........490........
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Query Sequence  SLYEVMEQAWRLDPEERPTFEYLQS
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Template Sequence  DLQDVLKCCLKRDPKQRISIPELLA
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   763......770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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