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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank94Aligned Residues244
% Identity22%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   249250.........260.........270.. .......280. ........290.........300......
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Query Sequence  NSIALERRLGTGCFGDVWLGTWNC. STKVAVKTL. KPGTMSPKAFLEEAQIMKLLRHDKL
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI
Template Known Secondary structure  TTTTT

TTT
S
TT

BTTB
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   26...30.........40.........50.........60.........70.........80.....
 
   307..310..... ....320.........330.........340.........350.........360.....
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Query Sequence  VQLYAVVSE. EPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAAQVAEGMAYMERMN
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Template Sequence  IRLYETFEDNTDIYLVMELCTGGELFERVVHKR. . VFRESDAARIMKDVLSAVAYCHKLN
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SGGGGGTTTS..S

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   86...90.........100.........110........ .120.........130.........140...
 
   366...370........ .380.........390.........400.........410.........420..
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Query Sequence  YIHRDLRAANILV. . . GEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPEAALFGR
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Template Sequence  VAHRDLKPENFLFLTDSPDSPLKLIDFGLAA. . RFKPGKMMRTKVGTPYYVSPQVLEGL.
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SGGGSSSSTT




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TT

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GGGS
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   144.....150.........160.........170.... .....180.........190.........200
 
   423......430.........440.........450.........460........ .470.........480
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Query Sequence  FTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQVEHGYHMPCP. . PGCPASLYEVME
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Template Sequence  YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIR
Template Known Secondary structure  B
TT.SS
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   201........210......... 220.........230.........240.........250.........
 
   481........490........
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Query Sequence  QAWRLDPEERPTFEYLQS
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Template Sequence  RLLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

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   261........270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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