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Job DescriptionP14234
Confidence99.84%DateWed Jul 10 14:36:25 BST 2013
Rank388Aligned Residues102
% Identity28%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.........150.........160.........170.........180.
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Query Sequence  APVDSIQAEEWYFGKISRKDAERQLLSSGNPQGAFLIRESETTKGAYSLSIRDWDQNRGD
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Template Sequence  GHMQDLSVHLWYAGPMERAGAESIL. . ANRSDGTFLVRQRVKDAAEFAISIK. . . . . YNV
Template Known Secondary structure 

SS
STTSSSS

..S
TTB

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   661........670.........680..... ....690.........700.........710 ...
 
   182.......190.........200.........210........ .220.........230.
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Query Sequence  HIKHYKIRKLDTGGYYITTRAQFDSIQDLVRHYMEVN. . . . . DGLCYLLTAPCTT
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Template Sequence  EVKHIKIMT. AEGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKE
Template Known Secondary structure  S
.TTSSSSSSSTTS
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B
S

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   714.....720.. .......730.........740.........750.........760.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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