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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank137Aligned Residues255
% Identity21%Templatec2c47D_
PDB info PDB header:transferaseChain: D: PDB Molecule:casein kinase 1 gamma 2 isoform; PDBTitle: structure of casein kinase 1 gamma 2
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   249250.........260.........270.........280.........290.........300........
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Query Sequence  NSIALERRLGTGCFGDVWLGTWNCSTKVAVKTLKPGTMSPKAFLEEAQIMKLLRHDKLVQ
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Template Sequence  PNFRVGKKIGELRLGKNL. . . . YTNEYVAIKLEP. IKSRAPQLHLEYRFYKQLSATEGVP
Template Known Secondary structure  GG


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   44.....50.........60. ........70... ......80.........90........
 
   309310..... ....320.........330.........340.........350.........360.......
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Query Sequence  LYAVVSE. EPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAAQVAEGMAYMERMNYI
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Template Sequence  QVYYFGPGKYNAMVLELL. GPSLEDLFDLCDR. TFTLKTVLMIAIQLITRMEYVHTKSLI
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   104.....110.........120. ........130.... .....140.........150.........160.
 
   368.370.........380.. .......390........ .400.........410.......
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Query Sequence  HRDLRAANILVGEYL. . . . . ICKIADFGLARLIEDN. . . . . EYNPQQGTKFPIKWTAPEA
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Template Sequence  YRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPTKKHIPYREHKSLTGTARYMSINT
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GGG

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   163......170.........180.........190.........200.........210.........220..
 
   418.420.........430.........440......... 450.........460........ .470
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Query Sequence  ALFGRFTVKSDVWSFGILLTELITKGRVPYPG. . . MNNREVLEQVEHGYHMPCP. . . . PG
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Template Sequence  HLGKEQSRRDDLEALGHMFMYFLR. GSLPWQGLKADTLKERYQKIGDTKRATPIEVLCEN
Template Known Secondary structure  TT



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   224.....230.........240....... ..250.........260.........270.........280..
 
   471........480.........490.........500.........510.
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Query Sequence  CPASLYEVMEQAWRLDPEERPTFEYLQSFLEDYFTSTEPQY
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Template Sequence  FPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGFVF
Template Known Secondary structure  S
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   283......290.........300.........310.........320...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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