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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank149Aligned Residues247
% Identity21%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   246...250.........260.........270.. .......280.. .......290.........300
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Query Sequence  IDRNSIALERRLGTGCFGDVWLGTWNC. STKVAVKTLK. . . . PGTMSPKAFLEEAQIMKL
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ
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STT
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STTTTT
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   240.........250.........260.........270.........280.........290.........
 
   301........310..... ....320.........330.........340.........350........
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Query Sequence  . LRHDKLVQLYAVVSE. EPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAAQVAEGM
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Template Sequence  ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR. . KLPEEHARFYSAEISLAL
Template Known Secondary structure  TTSSTTB


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   300.........310.........320.........330......... 340.........350.......
 
   359360.........370.........380.........390.........400.........410........
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Query Sequence  AYMERMNYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPEAA
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Template Sequence  NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSF. . CGTPNYIAPEIL
Template Known Secondary structure  TT
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   358.360.........370.........380.........390.........400... ......410.....
 
   419420.........430.........440.........450.........460.........470........
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Query Sequence  LFGRFTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQVEHGYHMPCPPGCPASLYEV
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Template Sequence  RGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILE. KQIRIPRSMSVKAASV
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   417..420.........430......... 440.........450........ .460.........470....
 
   479480.........490.. ......
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Query Sequence  MEQAWRLDPEERPT. . . . . . FEYLQS
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Template Sequence  LKSFLNKDPKERLGCLPQTGFADIQG
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   484.....490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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