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Job DescriptionP14234
Confidence100.00%DateWed Jul 10 14:36:25 BST 2013
Rank36Aligned Residues247
% Identity21%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   246...250.........260.........270.. .......280. ........290.......
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Query Sequence  IDRNSIALERRLGTGCFGDVWLGTWNC. STKVAVKTL. . . . . . . KPGTMSPKAFLEEAQI
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Template Sequence  LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL
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GGG
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   186...190.........200.........210.........220.........230.........240.....
 
   298.300.........310..... ....320.........330.........340.........350......
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Query Sequence  MKLLRHDKLVQLYAVVSE. EPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAAQVAE
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Template Sequence  VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG. . VFSEADMRFYAAEIIL
Template Known Secondary structure  SSS

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   246...250.........260.........270.........280....... ..290.........300...
 
   357..360.........370.........380.........390.........400.........410......
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Query Sequence  GMAYMERMNYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPE
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Template Sequence  GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG. . . YMAPE
Template Known Secondary structure  TT




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   304.....310.........320.........330.........340.........350..... ....360
 
   417..420.. .......430.........440......... 450.........460.........470...
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Query Sequence  AALFGR. FTVKSDVWSFGILLTELITKGRVPYPG. . MNNREVLEQVEHGYHMPCPPGCPA
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Template Sequence  VLQKGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP
Template Known Secondary structure  SSS



T.SS
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   361........370.........380...... ...390.........400.........410.........
 
   474.....480.........490. .......
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Query Sequence  SLYEVMEQAWRLDPEERP. . . . . TFEYLQS
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Template Sequence  ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE
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   420.........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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