Job Description Q4JIM5 Confidence 100.00% Date Tue Jul 30 13:05:37 BST 2013 Rank 276 Aligned Residues 254 % Identity 19% Template c4fi1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:casein kinase ii subunit alpha; PDBTitle: crystal structure of scck2 alpha in complex with atp Resolution 2.09 Å

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		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	H	D	K	W	E	M	E	R	T	D	I	T	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	V	G	V	W	K	K	Y	S	L	T	V	A	V	K	T	F	K	E	D	T	M	E	V	E	E	F	L	K	E	A	A	V
Query Conservation
Alig confidence																																																			.	.
Template Conservation																																																			.	.
Template Sequence		N	T	V	I	D	W	S	T	N	T	K	D	Y	E	I	E	N	K	V	G	R	G	K	Y	S	E	V	F	Q	G	V	K	L	D	S	K	V	K	I	V	I	K	M	L	K	P	V	K	K	.	.	K	K	I	K	R	E	I	K	I
Template Known Secondary structure		G						B	S		S	T	T											T	T									T	T	T	T										S				.	.
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.
		336	.	.	.																																								340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	H	P	N	L	V	Q	L	L	G	V	C	T	L	E	P	P
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	D	L	S	N	E	K	V	P	P	T	T	L	P	F	Q	K	D	Q	Y	Y	T	N	Q	K	E	D	V	L	K	F	I	R	P	Y	I	F	D	Q	P	H	N	G	H	A	N	I	I	H	L	F	D	I	I	K	D	P	I	S
Template Known Secondary structure									S	S		G	G	G	S																	T	T			S					S				G	G	G	G	B										T	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
				357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	F	Y	I	V	T	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	C	S	R	E	E	V	T	A	V	V	L	L	Y	M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	F	I	H	R	D	L	A	A	R	N
Query Conservation		.	.
Alig confidence		.	.																				.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		K	T	P	A	L	V	F	E	Y	V	D	N	V	D	F	R	I	L	Y	P	K	.	.	.	.	.	L	T	D	L	E	I	R	F	Y	M	F	E	L	L	K	A	L	D	Y	C	H	S	M	G	I	M	H	R	D	V	K	P	H	N
Template Known Secondary structure																				G	G	G	.	.	.	.	.																							T	T							S	G	G	G
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		415	.	.		.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.		.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure					.																																														.
Query SS confidence					.																																														.
Query Sequence		C	L	V	.	G	E	N	H	V	V	K	V	A	D	F	G	L	S	R	L	M	T	G	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	S	L	A	Y	N	T	F	.	S	I	K	S	D	V	W	A	F	G
Query Conservation					.																																														.
Alig confidence					.																						.	.																							.
Template Conservation																											.	.
Template Sequence		V	M	I	D	H	K	N	K	K	L	R	L	I	D	W	G	L	A	E	F	Y	H	V	N	M	.	.	E	Y	N	V	R	V	A	S	R	F	F	K	G	P	E	L	L	V	D	Y	R	M	Y	D	Y	S	L	D	L	W	S	F	G
Template Known Secondary structure						G	G	G	T								T	T						T	T		.	.				S			S		G	G	G							T	T						T
Template Predicted Secondary structure																											.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	L	S	Q	V	Y	D	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	M	L	A	S	M	I	F	K	R	E	P	F	F	H	G	T	S	N	T	D	Q	L	V	K	I	V	K	V	L	G	T	S	D	F	E	K	Y	L	L	K	Y	E	I	T	L	P	R	E	F	Y	D	M	D	Q	Y	I	R	K	P
Template Known Secondary structure										T		S	S	S	S			S	S																								T	T					G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
				499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	E	K	G	Y	R	M	E	Q	P	E	G	C	P	P	K	V	Y	E	L	M	R	A	C	W	K	W	S	P	A	D	R	P	S	F	A	E	T	H	Q	A
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		W	H	R	F	I	N	D	G	N	K	H	L	S	G	N	D	E	I	I	D	L	I	D	N	L	L	R	Y	D	H	Q	E	R	L	T	A	K	E	A	M	G	H
Template Known Secondary structure		G	G	G	G			T	T	T						S											S		S	S	G	G	G	S								T	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D