Job Description Q4JIM5 Confidence 100.00% Date Tue Jul 30 13:05:37 BST 2013 Rank 171 Aligned Residues 240 % Identity 15% Template c3vwaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cytoplasmic export protein 1; PDBTitle: crystal structure of cex1p Resolution 2.20 Å

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		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	G	Q	Y	G	E	V	Y	V	G	V	W	K	K	Y	S	L	T	V	A	V	K	T	F	K	E	D	T	M	E	V	E	E	F	L	K	E	A	A	V	M	K	E	I	K	H	P	N	L	V	Q	L	L	G	V	C	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	E	T	A	L	W	Q	C	F	D	G	T	R	K	A	D	S	L	P	V	T	V	F	K	A	K	R	S	P	E	N	E	S	L	I	L	N	A	V	H	K	S	K	I	L	K	I	P	G	L	C	T	V	L	E	T	F	D	S
Template Known Secondary structure		S				S	S									T	T	T													T	T	T																	T	T	B									S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
			354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	P	P	F	Y	I	V	T	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	C	S	R	E	E	V	T	A	V	V	L	L	Y	M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	F	I	H	R	D	L	A	A
Query Conservation		.
Alig confidence		.																							.	.	.	.																							.	.
Template Conservation																									.	.	.	.																							.	.
Template Sequence		D	P	Q	S	T	F	I	V	T	E	R	V	V	P	F	P	W	D	N	L	G	S	L	.	.	.	.	S	Q	N	K	F	G	V	E	L	G	I	S	Q	L	L	A	T	L	G	F	L	K	.	.	N	F	V	L	G	T	L	S	K
Template Known Secondary structure		S	T	T	S													G	G	G					.	.	.	.	T	T																			T	T	.	.	T							S	G
Template Predicted Secondary structure																									.	.	.	.																							.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	C	L	V	G	E	N	H	V	V	K	V	A	D	F	G	L	S	R	L	M	T	G	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	S	L	A	Y	N	T	F	S	I	K	S	D	V	W	A	F	G
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		D	S	V	F	I	N	I	K	G	E	W	V	L	F	G	L	E	L	C	S	S	K	E	G	L	S	A	F	E	F	A	.	S	R	A	R	S	Y	Y	N	I	I	G	S	Q	L	P	C	E	D	P	N	T	I	D	S	X	G	L	G
Template Known Secondary structure		G	G					T	T	S								T	T				S	T	T								.											T						S		T	T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.											.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	L	S	Q	V	Y	D	L	L	E	K	G	Y	R	M	.	.	.	.	.	.	.	.	.	.	E	Q	P	E	G	C	P	P	K	V	Y	E	L	M	R	A	C	W
Query Conservation																																		.	.	.	.	.	.	.	.	.	.
Alig confidence										.																								.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		L	L	I	K	S	L	X	A	.	P	S	C	L	P	K	D	W	I	V	N	V	N	X	I	S	D	G	K	I	T	I	E	N	F	R	K	R	L	E	N	T	E	T	W	R	S	N	P	L	I	N	F	Y	Q	E	L	R	E	L	H
Template Known Secondary structure								S		.	T	T	T	S		G	G	G									T	T		S												S																	T	G	G
Template Predicted Secondary structure										.
Template SS confidence
		197	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	S	P	A	D	R	P	S	F	A	E	T	H	Q	A	F	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	D	P	Q	G	K	L	V	V	X	S	N	L	E	N	L	Y	L
Template Known Secondary structure		G	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D