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Job DescriptionQ4JIM5
Confidence100.00%DateTue Jul 30 13:05:37 BST 2013
Rank292Aligned Residues259
% Identity19%Templatec3utoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase region from c.elegans (fn31-nl-kin-crd-ig26)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   276...280.........290.........300.........310.........320. ........330....
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Query Sequence  PIHDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTFKE. DTMEVEEFLKEAA
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Template Sequence  PVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQ
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BSS
GGGTTTTTT



S
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   144.....150.........160.........170.........180.........190.........200...
 
   335....340.........350.........360.........370.........380.........390....
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Query Sequence  VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQIS
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Template Sequence  TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD. EHNKMSEDEAVEYMRQVC
Template Known Secondary structure  T

TTB


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BT
.TTS
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   204.....210.........220.........230.........240.... .....250.........260..
 
   395....400.........410.........420 .........430.........440.........450..
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Query Sequence  SAMEYLEKKNFIHRDLAARNCLVGEN. . HVVKVADFGLSRLMTGDTYTAHAGAKFPIKWT
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Template Sequence  KGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT. . TGTAEFA
Template Known Secondary structure  TT




GGGSSSS





SS


TTS..
SSGGG
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   263......270.........280.........290.........300.........310... ......320
 
   453......460.........470.........480.........490.........500. ........
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Query Sequence  APESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKG. . . YRMEQPEG
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Template Sequence  APEVAEGKPVGYYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSG
Template Known Secondary structure 
TT

B
.S

SS

SSTT




SGGGTT
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   321........330.........340........ .350.........360.........370.........
 
   510.........520.........530........
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Query Sequence  CPPKVYELMRACWKWSPADRPSFAETHQA
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Template Conservation   
      
       
  
      
  
Template Sequence  ISEDGKDFIRKLLLADPNTRMTIHQALEH
Template Known Secondary structure  S
TTS
SSGGGS

S
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   380.........390.........400........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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