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Job DescriptionQ4JIM5
Confidence100.00%DateTue Jul 30 13:05:37 BST 2013
Rank203Aligned Residues239
% Identity23%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   283......290.........300.........310.........320.........330.........340..
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Query Sequence  MERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTFKEDTMEVEEFLKEAAVMKEIKHP
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHP
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TTT


SSTT
S
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T
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   16...20.........30.........40.........50.........60.........70.....
 
   343......350.........360.........370.........380.........390.........400..
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Query Sequence  NLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSAMEYLEK
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Template Sequence  NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR. . FSEDEARFFFQQLISGVSYAHA
Template Known Secondary structure  TB


SS

TT
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   76...80.........90.........100.........110. ........120.........130...
 
   403......410.........420 .........430.........440.........450.........460
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Query Sequence  KNFIHRDLAARNCLVGEN. . HVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN
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Template Sequence  MQVAHRDLKLENTLLDGSPAPRLKIADFGY. . . . . . . . . . . . . . . . TPAYIAPEVLLKKE
Template Known Secondary structure  S
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GGG


SSS

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GGG


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   134.....140.........150.........160... ......170.......
 
   461........470.........480.........490 .........500. ........510.....
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Query Sequence  TFSIKSDVWAFGVLLWEIATYGMSPYPGID. . . . LSQVYDLLEKG. YRMEQPEGCPPKVY
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Template Sequence  YDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR
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.SS
TT

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TT



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   193......200.........210.. .......220.........230.........240.........250.
 
   516...520.........530.........540
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Query Sequence  ELMRACWKWSPADRPSFAETHQAFE
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Template Sequence  HLISRIFVADPAKRISIPEIRNHEW
Template Known Secondary structure  S
SSGGGS

TT
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   252.......260.........270......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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