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Job DescriptionQ4JIM5
Confidence100.00%DateTue Jul 30 13:05:37 BST 2013
Rank238Aligned Residues239
% Identity25%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   286...290.........300.........310.........320..... ....330......... 340
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Query Sequence  TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTFKEDTME. . . . VEEFLKEAAVMKEI. K
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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TTTTT

TTTTT
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   353......360.........370.........380.........390.........400.........410..
 
   341........350.........360.........370.........380.........390.........400
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Query Sequence  HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSAMEYL
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR. . FDEARARFYAAEIISALMFL
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   413......420.........430.........440.........450 .........460.........470
 
   401........410.........420.........430.........440.........450.........460
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Query Sequence  EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN
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Template Sequence  HDKGIIYRDLKLDNVLLDHEGHCKLADFGMC. . . . . . . . . . KEGICGTPDYIAPEILQEM
Template Known Secondary structure  TT
B




GGG
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TT
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GGG

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   471........480.........490.........500. ........510.........520
 
   461........470.........480.........490.........500.........510.........520
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Query Sequence  TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRA
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Template Sequence  LYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILN. DEVVYPTWLHEDATGILKS
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TT.SS
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   530.........540......... 550.........560........ .570.........580.......
 
   521........530. .......
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Query Sequence  CWKWSPADRPS. . . . . . FAETHQA
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Template Sequence  FMTKNPTMRLGSLTQGGEHAILRH
Template Known Secondary structure  T
SSGGGSTTSGGGT
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   588.590.........600.........610.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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