Return to main results Retrieve Phyre Job Id

Job DescriptionQ4JIM5
Confidence100.00%DateTue Jul 30 13:05:37 BST 2013
Rank15Aligned Residues256
% Identity25%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å
Model Dimensions (Å)X:69.865 Y:60.597 Z:82.852

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   277..280.........290.........300.........310.........320.... .....330..
Predicted Secondary structure 



















....
Query SS confidence 















































. . . .







Query Sequence  IHDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTFKEDTM. . . . EVEEFLKE
Query Conservation                   

 
  
 
           

 
       ....       
Alig confidence 















































....







Template Conservation                   

 
 

 
            


                  
Template Sequence  YFNVPVPPLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVE
Template Known Secondary structure  T





TTSSBTTTB
SSS

TTTT
Template Predicted Secondary structure 



























Template SS confidence 



























































   285....290.........300.........310.........320.........330.........340....
 
   333...... 340.........350.........360.........370.........380.........390.
Predicted Secondary structure 
.



















Query SS confidence 






.



















































Query Sequence  AAVMKEI. KHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMAT
Query Conservation        
. 
  

              
 
    
 
   
                  
Alig confidence 






.






































..










Template Conservation     
     

 

 
            
 
   

 
   
     ..           
Template Sequence  KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR. . FKEPHAVFYAA
Template Known Secondary structure  T
TT

TTB



B
SS


S
BSS..

Template Predicted Secondary structure 















..

Template SS confidence 



























































   391........400.........410.........420.........430....... ..440........
 
   392.......400.........410.........420.........430.........440.........450.
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  QISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKW
Query Conservation 
       

     




  
 
       
  


 
                    
Alig confidence 














































..










Template Conservation 

   
  

   






  



      

 


 
       ..      

  
Template Sequence  EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG. . VTTKFCGTPDY
Template Known Secondary structure  TS




STT
SSS



TT



TT..

B


S
SSS
Template Predicted Secondary structure 






















..


Template SS confidence 



























































   449450.........460.........470.........480.........490..... ....500......
 
   452.......460.........470.........480.........490.........500.........510.
Predicted Secondary structure 




























Query SS confidence 



























































Query Sequence  TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCP
Query Conservation   


           



 
  
 
    
  
                          
Alig confidence 




























.




















.







Template Conservation   


      
    












 .
  

           
    .   
   
Template Sequence  IAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEHN. VAYPKSMS
Template Known Secondary structure 

T


BST.SS
SS

SSSS
.



TTS
Template Predicted Secondary structure 






.











.







Template SS confidence 



























































   508.510.........520.........530...... ...540.........550....... ..560.....
 
   512.......520.........530. .......
Predicted Secondary structure 








.....
Query SS confidence 



















. . . . .






Query Sequence  PKVYELMRACWKWSPADRPS. . . . . FAETHQA
Query Conservation                
  

 .....       
Alig confidence 



















.....






Template Conservation      


  

   
  
             
Template Sequence  KEAVAICKGLMTKHPGKRLGCGPEGERDIKEH
Template Known Secondary structure  S
SSSTT
TT
STTSS
Template Predicted Secondary structure 











Template SS confidence 































   566...570.........580.........590.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D