Job Description Q4JIM5 Confidence 100.00% Date Tue Jul 30 13:05:37 BST 2013 Rank 294 Aligned Residues 245 % Identity 20% Template c3ll6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:cyclin g-associated kinase; PDBTitle: crystal structure of the human cyclin g associated kinase (gak) Resolution 2.10 Å

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		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		D	K	W	E	M	E	R	T	D	I	T	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	V	G	V	W	K	K	Y	S	L	T	V	A	V	K	T	F	K	.	E	D	T	M	E	V	E	E	F	L	K	E	A	A	V	M	K
Query Conservation																																												.
Alig confidence																					.																							.
Template Conservation																					.
Template Sequence		Q	T	V	E	L	G	E	L	R	L	R	V	R	R	V	L	A	E	G	.	F	A	F	V	Y	E	A	Q	D	V	G	S	G	R	E	Y	A	L	K	R	L	L	S	N	E	E	E	K	N	R	A	I	I	Q	E	V	C	F	M	K
Template Known Secondary structure							T	T													.										T	T	T												S	S
Template Predicted Secondary structure																					.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		338	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.									.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																		.	.	.	.	.	.	.	.
Query SS confidence					.																		.	.	.	.	.	.	.	.
Query Sequence		E	I	K	.	H	P	N	L	V	Q	L	L	G	V	C	T	L	E	P	P	F	.	.	.	.	.	.	.	.	Y	I	V	T	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	C	S	R	E	E	V	T	A	V	V	L	L	Y
Query Conservation					.																		.	.	.	.	.	.	.	.
Alig confidence					.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	S	G	H	P	N	I	V	Q	F	C	S	A	A	S	I	G	K	E	E	S	D	T	G	Q	A	E	F	L	L	L	T	E	L	C	K	G	Q	L	V	E	F	L	K	K	M	E	S	R	G	P	L	S	C	D	T	V	L	K
Template Known Secondary structure				T	T	S	T	T	B											G	G	G	S	T	T	S	S											S											T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.			.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	.	.	F	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	H	V	V	K	V	A	D	F	G	L	S	R	L	M	T	G	D	T	Y	T	A	H	A	G	A	K
Query Conservation																		.	.
Alig confidence																		.	.																																				.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		I	F	Y	Q	T	C	R	A	V	Q	H	M	H	R	Q	K	P	P	I	I	H	R	D	L	K	V	E	N	L	L	L	S	N	Q	G	T	I	K	L	C	D	F	G	S	A	T	T	I	S	H	Y	P	D	.	.	.	.	.	.	.
Template Known Secondary structure															T	S	S	S			B						G	G	G					T	T	S				B				T	T		B			T	T				.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	I	K	W	T	A	P	E	S	L	A	Y	N	T	F	S	I	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	L	S	Q	V	Y	D	L	L	E	K	G	Y	R	M	E	Q
Query Conservation
Alig confidence		.	.	.	.																															.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																															.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	T	P	E	I	I	D	Y	S	N	F	P	I	G	E	K	Q	D	I	W	A	L	G	C	I	L	Y	L	L	C	F	.	R	Q	H	P	F	E	S	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P
Template Known Secondary structure		.	.	.	.					S		S					S	S																		.	S	S		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.																															.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.																.
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	G	C	P	P	K	V	Y	E	L	M	R	A	C	W	K	W	S	P	A	D	R	P	S	F	A	E	T	H	Q	A	F	E	T	M	F	H	D	S	S	I	S	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	D	T	Q	Y	T	V	F	H	S	L	I	R	A	M	L	Q	V	N	P	E	E	R	L	S	I	A	E	V	V	H	Q	L	Q	E	I	A	A	A	R	N	V	N	P	K
Template Known Secondary structure		T			S	S											S		S	S	G	G	G	S																		T			T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D