Job Description Q4JIM5 Confidence 100.00% Date Tue Jul 30 13:05:37 BST 2013 Rank 303 Aligned Residues 235 % Identity 23% Template c3gc0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:kinase, cmgc cdk; PDBTitle: structure of the cmgc cdk kinase from giardia lamblia in complex with2 amp Resolution 2.00 Å

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		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	I	T	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	V	G	V	W	K	K	Y	S	L	T	V	A	V	K	T	F	K	E	D	T	M	E	V	E	E	F	L	K	E	A	A	V	M	K	E	I	K	H	P	N	L	V
Query Conservation
Alig confidence																																							.	.	.	.
Template Conservation																																							.	.	.	.
Template Sequence		D	R	Y	R	R	I	T	K	L	G	E	G	T	Y	G	E	V	Y	K	A	I	D	T	V	T	N	E	T	V	A	I	K	R	I	R	L	E	.	.	.	.	H	T	A	I	R	E	V	S	L	L	K	E	L	Q	H	R	N	I	I
Template Known Secondary structure		G	G											S	S	S								T	T	T	T												.	.	.	.										G	G	G			B	T	T	B
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	L	G	V	C	T	L	E	P	P	F	Y	I	V	T	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	C	S	R	E	E	V	T	A	V	V	L	L	Y	M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	F
Query Conservation
Alig confidence																																		.	.	.
Template Conservation																																		.	.	.
Template Sequence		E	L	K	S	V	I	H	H	N	H	R	L	H	L	I	F	E	Y	A	E	N	D	L	K	K	Y	M	D	K	N	P	D	.	.	.	V	S	M	R	V	I	K	S	F	L	Y	Q	L	I	N	G	V	N	F	C	H	S	R	R	C
Template Known Secondary structure										T	T										S											T	T	.	.	.																							T	T
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		406	.	.	.	410	.	.	.	.	.	.	.		.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.		.
Predicted Secondary structure														.																																														.
Query SS confidence														.																																														.
Query Sequence		I	H	R	D	L	A	A	R	N	C	L	V	.	G	E	N	H	V	V	K	V	A	D	F	G	L	S	R	L	M	T	G	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	S	L	A	Y	N	T	F	.	S
Query Conservation														.																																														.
Alig confidence														.																		.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																.	.	.	.	.	.	.	.	.	.
Template Sequence		L	H	R	D	L	K	P	Q	N	L	L	L	S	V	E	T	P	V	L	K	I	G	D	F	G	L	A	R	A	F	.	.	.	.	.	.	.	.	.	.	E	I	I	T	L	W	Y	R	P	P	E	I	L	L	G	S	R	H	Y	S
Template Known Secondary structure				S				G	G	G															T	T						.	.	.	.	.	.	.	.	.	.		G	G	G	G	G	G							T	T		S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.											.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	L	S	Q	V	Y	D	L	L	E	K	G	Y	R	M	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		T	S	V	D	I	W	S	I	A	C	I	W	A	E	M	L	M	.	K	T	P	L	F	P	G	D	S	E	I	D	Q	L	F	K	I	F	E	V	L	G	L	P	D	D	T	T	W	P	G	V	T	A	L	P	D	W	K	Q	S	F
Template Known Secondary structure		T																	.	S	S		S	S			S	S																	T	T	T	S	T	T	G	G	G	S	T	T			T	T	S
Template Predicted Secondary structure																			.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
														507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	P	E	G	C	P	P	K	V	Y	E	L	M	R	A	C	W	K	W	S	P	A	D	R	P	S	F	A	E	T	H	Q	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	F	R	G	K	T	L	K	R	V	L	G	A	L	L	D	D	E	G	L	D	L	L	T	A	M	L	E	M	D	P	V	K	R	I	S	A	K	N	A	L	E	H
Template Known Secondary structure														G	G	G	S												T		S	S	G	G	G	S									S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D