Job Description Q4JIM5 Confidence 100.00% Date Tue Jul 30 13:05:37 BST 2013 Rank 79 Aligned Residues 241 % Identity 23% Template c3fbvL_ PDB info PDB header:transferase, hydrolase Chain: L: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the oligomer formed by the kinase-ribonuclease2 domain of ire1 Resolution 3.20 Å

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		292	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																							.
Query SS confidence												.																																							.
Query Sequence		H	K	L	G	G	G	Q	Y	G	E	.	V	Y	V	G	V	W	K	K	Y	S	L	T	V	A	V	K	T	F	K	E	D	T	M	E	V	E	E	F	L	K	E	A	A	V	M	K	E	I	.	K	H	P	N	L	V	Q	L	L	G
Query Conservation												.																																							.
Alig confidence												.								.	.											.	.																		.
Template Conservation																				.	.											.	.
Template Sequence		K	I	L	G	Y	G	S	S	G	T	V	V	F	Q	G	S	F	Q	.	.	G	R	P	V	A	V	K	R	M	L	.	.	I	D	F	C	D	I	A	L	M	E	I	K	L	L	T	E	S	D	D	H	P	N	V	I	R	Y	Y	C
Template Known Secondary structure								T	T	T								S	S	.	.	S										.	.	G	G	G															T	T	S	T	T	B
Template Predicted Secondary structure																				.	.											.	.
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.			.	.	.	.	700	.	.	.	.	.			.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.						.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		V	C	T	L	E	P	P	F	Y	I	V	T	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	C	S	R	E	E	V	T	A	V	V	.	.	.	.	.	L	L	Y	M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N
Query Conservation																																						.	.	.	.	.
Alig confidence																		.																				.	.	.	.	.
Template Conservation																		.
Template Sequence		S	E	T	T	D	R	F	L	Y	I	A	L	E	L	C	N	.	L	N	L	Q	D	L	V	E	S	K	N	V	S	D	E	N	L	K	L	Q	K	E	Y	N	P	I	S	L	L	R	Q	I	A	S	G	V	A	H	L	H	S	L	K
Template Known Secondary structure						T	T										S	.								T			S		S	T	T						S	S																				T	T
Template Predicted Secondary structure																		.
Template SS confidence
		734	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.														.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	V	A	D	F	G	L	S	R	L	M	T	G	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	H	R	D	L	K	P	Q	N	I	L	V	S	T	S	S	R	F	T	A	D	Q	Q	T	G	A	E	N	L	R	I	L	I	S	D	F	G	L	C	K	K	L	D	S	G	Q	F	R	N	L	N	N	P	S	G	T	S	G	W
Template Known Secondary structure								S	T	T	T											S			S	S		S							B				S	S					T	T	T									S	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.
		452	.	.	.	.	.	.	.				460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		T	A	P	E	S	L	A	Y	.	.	.	N	T	F	S	I	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	L	S	Q	V	Y	D	L	L	E	K	G	Y	R	M	E	Q	P	E
Query Conservation										.	.	.
Alig confidence										.	.	.																												.
Template Conservation																																								.
Template Sequence		R	A	P	E	L	L	E	E	S	T	K	R	R	L	T	R	S	I	D	I	F	S	M	G	C	V	F	Y	Y	I	L	S	K	G	K	H	P	F	.	G	D	K	Y	S	R	E	S	N	I	I	R	G	I	F	S	L	D	E	M	K
Template Known Secondary structure								S	T	T	T						T																T	T	S			T	T	.		S											T								T
Template Predicted Secondary structure																																								.
Template SS confidence
		856	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.		.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.
							509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	G	C	P	P	K	V	Y	E	L	M	R	A	C	W	K	W	S	P	A	D	R	P	S	F	A	E	T	H	Q	A
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		C	L	H	D	R	S	L	I	A	E	A	T	D	L	I	S	Q	M	I	D	H	D	P	L	K	R	P	T	A	M	K	V	L	R	H
Template Known Secondary structure		T																		T		S	S	T	T	T	S								T	S
Template Predicted Secondary structure
Template SS confidence
		943	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D