Job Description Q4JIM5 Confidence 100.00% Date Tue Jul 30 13:05:37 BST 2013 Rank 38 Aligned Residues 258 % Identity 40% Template c3dpkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrophage colony-stimulating factor 1 receptor; PDBTitle: cfms tyrosine kinase in complex with a pyridopyrimidinone2 inhibitor Resolution 1.95 Å

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		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																							.	.										.	.
Query SS confidence																																							.	.										.	.
Query Sequence		P	I	H	D	K	W	E	M	E	R	T	D	I	T	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	V	G	V	W	K	K	Y	S	L	.	.	T	V	A	V	K	T	F	K	E	.	.	D	T	M	E	V	E	E	F	L	K
Query Conservation																																							.	.										.	.
Alig confidence																																							.	.										.	.
Template Conservation
Template Sequence		P	Y	N	E	K	W	E	F	P	R	N	N	L	Q	F	G	K	T	L	G	A	G	A	F	G	K	V	V	E	A	T	A	F	G	L	G	A	V	L	K	V	A	V	K	M	L	K	S	T	A	H	A	D	E	K	E	A	L	M	S
Template Known Secondary structure					G	G	G	B			G	G	G											S	S										S														T	T
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
		332	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		E	A	A	V	M	K	E	I	.	K	H	P	N	L	V	Q	L	L	G	V	C	T	L	E	P	P	F	Y	I	V	T	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	C	S	R	E	E	V	T	A	V	V	L	L	Y	M	A
Query Conservation										.
Alig confidence										.																																			.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		E	L	K	I	M	S	H	L	G	Q	H	E	N	I	V	N	L	L	G	A	C	T	H	G	G	P	V	L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	.	.	.	.	R	R	Q	L	S	S	R	D	L	L	H	F	S
Template Known Secondary structure													T	T	B									S	S	S	S									T	T								.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		633	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.					.	.	.	.	680	.	.	.	.	.	.	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	F	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	H	V	V	K	V	A	D	F	G	L	S	R	L	M	T	G	D	T	Y	T	A	H	A	G	A	K	F	P	I	K
Query Conservation
Alig confidence																																																		.	.	.
Template Conservation																																																		.	.	.
Template Sequence		S	Q	V	A	Q	G	M	A	F	L	A	S	K	N	C	I	H	R	D	V	A	A	R	N	V	L	L	T	N	G	H	V	A	K	I	G	D	F	G	L	A	R	D	I	M	N	D	S	.	.	.	N	Y	I	V	R	L	P	V	K
Template Known Secondary structure														T	T				S			S	G	G	G					G	G	G								T	T	T	S		G	G	G		T	.	.	.	T	S	B			B		G	G
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.				.	.	810	.	.	.	.	.	.
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.		.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		W	T	A	P	E	S	L	A	Y	N	T	F	S	I	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	L	S	Q	V	Y	.	D	L	L	E	K	G	Y	R	M	E	Q	P	E	G
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		W	M	A	P	E	S	I	F	D	C	V	Y	T	V	Q	S	D	V	W	S	Y	G	I	L	L	W	E	I	F	S	L	G	L	N	P	Y	P	G	I	L	V	N	S	K	F	Y	K	L	V	K	D	G	Y	Q	M	A	Q	P	A	F
Template Known Secondary structure		G	S																												T	T	S			S	S	T	T			S	S									T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		821	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	P	K	V	Y	E	L	M	R	A	C	W	K	W	S	P	A	D	R	P	S	F	A	E	T	H	Q	A	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	K	N	I	Y	S	I	M	Q	A	C	W	A	L	E	P	T	H	R	P	T	F	Q	Q	I	C	S	F	L	Q
Template Known Secondary structure														T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		881	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D