Job Description Q4JIM5 Confidence 100.00% Date Tue Jul 30 13:05:37 BST 2013 Rank 170 Aligned Residues 244 % Identity 14% Template c3byvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rhoptry kinase; PDBTitle: crystal structure of toxoplasma gondii specific rhoptry2 antigen kinase domain Resolution 1.80 Å

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		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320																										.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	T	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	V	G	V	W	K	K	Y	S	L	T	V	A	V	K	T	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		T	L	V	R	G	T	V	L	G	Q	E	D	P	Y	A	Y	L	E	A	T	D	E	T	.	G	E	S	F	E	V	H	V	P	Y	F	T	E	P	P	S	N	A	I	K	Q	M	K	E	E	V	L	R	L	R	L	L	R	G	I	K
Template Known Secondary structure													T	T											.																T	T											G	G	G	G	S	T	T
Template Predicted Secondary structure																									.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.					.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		D	T	M	E	V	E	E	F	L	K	E	A	A	V	M	K	E	I	K	H	P	N	L	V	Q	L	L	G	V	C	T	L	E	P	P	F	Y	I	V	T	.	.	.	.	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	C	S
Query Conservation																																										.	.	.	.
Alig confidence																																										.	.	.	.															.
Template Conservation																																																												.
Template Sequence		N	Q	K	Q	A	K	V	H	L	R	F	I	F	P	F	D	L	V	K	D	P	Q	K	K	K	M	I	R	V	M	W	V	L	S	R	F	F	L	Y	P	R	M	Q	S	N	L	Q	T	F	G	E	V	L	L	S	H	S	S	.	T
Template Known Secondary structure		S										B				S						T	T	S		S									S									S													T	T	T	.	T
Template Predicted Secondary structure																																																												.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	E	V	T	A	V	V	L	L	Y	M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	F	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	H	V	V	K	V	A	D	F	G	L	S	R	L	M	T	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	K	S	L	V	H	H	A	R	L	Q	L	T	L	Q	V	I	R	L	L	A	S	L	H	H	Y	G	L	V	H	T	Y	L	R	P	V	D	I	V	L	D	Q	R	G	G	V	F	L	T	G	F	E	H	L	V	R	D	G	A	R
Template Known Secondary structure		T																									T	T				S				G	G	G					T	T								G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		438	.	440	.	.	.	.							.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		T	Y	T	A	H	A	G	.	.	.	.	.	.	A	K	F	P	I	K	W	T	A	P	E	S	L	A	Y	N	T	F	S	I	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	L
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																																					.										.
Template Conservation																																																			.										.
Template Sequence		V	V	S	S	V	S	R	G	F	E	P	P	E	L	E	A	R	R	A	T	I	S	Y	H	R	D	R	R	T	L	M	T	F	S	F	D	A	W	A	L	G	L	V	I	Y	W	I	W	C	.	A	D	L	P	I	G	G	S	E	.
Template Known Secondary structure								T	T											T	S	T																													.	S	S						S	G	.
Template Predicted Secondary structure																																																			.										.
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.		500	.	.	.	.	.	.	.	.
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.										530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	V	Y	D	L	L	E	K	G	Y	R	M	E	Q	P	E	G	C	P	P	K	V	Y	E	L	M	R	A	C	W	K	W	S	P	A	D	R	.	.	.	.	.	.	.	.	.	P	S	F	A	E	T	H	Q	A	F	E	T	M
Query Conservation																																								.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	W	I	F	R	S	C	K	N	I	P	Q	P	V	R	A	L	L	E	G	F	L	R	Y	P	K	E	D	R	L	L	P	L	Q	A	M	E	T	P	E	Y	E	Q	L	R	T	E	L	S	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	G	G	G	S	S																T		S	S	G	G	G									T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		543	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P
Template Known Secondary structure		G	G
Template Predicted Secondary structure
Template SS confidence
		565	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D