Job Description Q4JIM5 Confidence 100.00% Date Tue Jul 30 13:05:37 BST 2013 Rank 224 Aligned Residues 224 % Identity 27% Template c3a60B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal protein s6 kinase beta-1; PDBTitle: crystal structure of unphosphorylated p70s6k1 (form i) Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		E	M	E	R	T	D	I	T	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	V	G	V	.	.	.	W	K	K	Y	S	L	T	V	A	V	K	T	F	K	E	D	T	M	E	V	E	E	F	L	K	E	A	A	V	M	K	E
Query Conservation																											.	.	.
Alig confidence																											.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	R	P	E	C	F	E	L	L	R	V	L	G	K	G	G	Y	G	K	V	F	Q	V	R	K	V	T	G	A	N	T	G	K	I	F	A	M	K	V	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					G	G	G											S	S	S									S	S	T	T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	H	P	N	L	V	Q	L	L	G	V	C	T	L	E	P	P	F	Y	I	V	T	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	C	S	R	E	E	V	T	A	V	V	L	L	Y	M	A	T	Q	I	S	S	A	M	E
Query Conservation
Alig confidence																																										.	.
Template Conservation																																										.	.
Template Sequence		K	K	H	P	F	I	V	D	L	I	Y	A	F	Q	T	G	G	K	L	Y	L	I	L	E	Y	L	S	G	G	E	L	F	M	Q	L	E	R	E	G	I	.	.	F	M	E	D	T	A	C	F	Y	L	A	E	I	S	M	A	L	G
Template Known Secondary structure					T	T	B										S	S										T	T	T	T	S								T		.	.
Template Predicted Secondary structure																																										.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	E	K	K	N	F	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	H	V	V	K	V	A	D	F	G	L	S	R	L	M	T	G	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	S	L	A
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	H	Q	K	G	I	I	Y	R	D	L	K	P	E	N	I	M	L	N	H	Q	G	H	V	K	L	T	D	F	G	L	C	K	.	.	.	.	.	.	.	.	.	.	.	E	S	C	G	T	I	E	Y	M	A	P	E	I	L	M
Template Known Secondary structure						T	T				S				G	G	G					T	T					B				T	T			.	.	.	.	.	.	.	.	.	.	.							T	T	S						T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.												.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	T	F	S	I	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	L	S	Q	V	Y	D	L	L	E	K	G	Y	R	M	E	Q	P	E	G	C	P	P	K	V	Y	E	L	M
Query Conservation
Alig confidence																								.																				.
Template Conservation																								.																				.
Template Sequence		R	S	G	H	N	R	A	V	D	W	W	S	L	G	A	L	M	Y	D	M	L	T	.	G	A	P	P	F	T	G	E	N	R	K	K	T	I	D	K	I	L	K	.	C	K	L	N	L	P	P	Y	L	T	Q	E	A	R	D	L	L
Template Known Secondary structure		T	T	T	S	S	T																	.	S	S		T	T			S	S											.							S	S	S
Template Predicted Secondary structure																								.																				.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		519	520	.	.	.	.	.	.	.	.	.	530	.						.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		R	A	C	W	K	W	S	P	A	D	R	P	S	.	.	.	.	.	F	A	E	T	H	Q	A
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		K	K	L	L	K	R	N	A	A	S	R	L	G	A	G	P	G	D	A	G	E	V	Q	A	H
Template Known Secondary structure					S		S		T	T	T	S	T	T		S	T	T	T						T	S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D