Job Description Q4JIM5 Confidence 100.00% Date Tue Jul 30 13:05:37 BST 2013 Rank 256 Aligned Residues 248 % Identity 23% Template c2pk9A_ PDB info PDB header:signaling protein,transferase/cell cycle Chain: A: PDB Molecule:cyclin-dependent protein kinase pho85; PDBTitle: structure of the pho85-pho80 cdk-cyclin complex of the2 phosphate-responsive signal transduction pathway Resolution 2.91 Å

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		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		I	T	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	V	G	V	W	K	K	Y	S	L	T	V	A	V	K	T	F	K	E	D	T	M	.	E	V	E	E	F	L	K	E	A	A	V	M	K	E	I	K	H	P	N	L	V	Q
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		F	K	Q	L	E	K	L	G	N	G	T	Y	A	T	V	Y	K	G	L	N	K	T	T	G	V	Y	V	A	L	K	E	V	K	L	S	E	E	G	T	P	S	T	A	I	R	E	I	S	L	M	K	E	L	K	H	E	N	I	V	R
Template Known Secondary structure												S	S									S	S	S													T	T		S												T	T			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	V	C	T	L	E	P	P	F	Y	I	V	T	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	C	S	R	E	E	V	T	A	V	V	L	L	Y	M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	F	I
Query Conservation
Alig confidence							.	.																					.	.
Template Conservation							.	.																					.	.
Template Sequence		L	Y	D	V	I	.	.	H	N	K	L	T	L	V	F	E	F	M	D	N	D	L	K	K	Y	M	D	.	.	S	R	T	R	G	L	E	L	N	L	V	K	Y	F	Q	W	Q	L	L	Q	G	L	A	F	C	H	E	N	K	I	L
Template Known Secondary structure							.	.																					.	.	T	T																										T	T
Template Predicted Secondary structure							.	.																					.	.
Template SS confidence
		68	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	D	L	A	A	R	N	C	L	V	G	E	N	H	V	V	K	V	A	D	F	G	L	S	R	L	M	T	G	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	S	L	A	Y	N	T	F	S	I	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	R	D	L	K	P	Q	N	L	L	I	N	K	R	G	Q	L	K	L	G	D	F	G	L	A	R	A	F	G	I	P	V	N	T	F	S	S	E	V	V	T	L	W	Y	R	A	P	D	V	L	M	G	S	R	T	Y	S	T	S	I
Template Known Secondary structure							G	G	G					T	T	S								S	S				T	T	S										S			T	T			T	T	G	G	G	T		S				T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	L	S	Q	V	Y	D	L	L	E	K	G	Y	R	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		D	I	W	S	C	G	C	I	L	A	E	M	I	T	.	G	K	P	L	F	P	G	T	N	D	E	E	Q	L	K	L	I	F	D	I	M	G	T	P	N	E	S	L	W	P	S	V	T	K	L	P	K	Y	N	P	N	I	Q	Q	R
Template Known Secondary structure																.	S	S		S				S	S														S			S	T	T		G	G	G	G	G		T	T			T	T
Template Predicted Secondary structure																.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
														506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	Q	P	E	G	C	P	P	K	V	Y	E	L	M	R	A	C	W	K	W	S	P	A	D	R	P	S	F	A	E	T	H	Q	A	F	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	P	R	D	L	R	Q	V	L	Q	P	H	T	K	E	P	L	D	G	N	L	M	D	F	L	H	G	L	L	Q	L	N	P	D	M	R	L	S	A	K	Q	A	L	H	H	P	W
Template Known Secondary structure						T					G	G	G		S	S																S	S	G	G	G	S							T	T	S	G	G
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D