Return to main results Retrieve Phyre Job Id

Job DescriptionQ4JIM5
Confidence99.33%DateTue Jul 30 13:05:37 BST 2013
Rank500Aligned Residues63
% Identity30%Templatec2kymA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of the bem1p sh3-ci domain from l.elongisporus in2 complex with ste20p peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130.........140.........150.. .......160.....
Predicted Secondary structure 


























...






Query SS confidence 











































. . .












Query Sequence  PNLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEWSEVRSKN. . . GQGWVPSNYITPV
Query Conservation                                              ...  
  
       
Alig confidence 































.










...












Template Conservation    

 




 
    


   

 
 

   .   
         
  
 

 



  
Template Sequence  PLFAVTLYEFKAERDDELDVSPGENLSICAHY. DYEWFIAKPINRLGGPGLVPVSYVRII
Template Known Secondary structure 


S
B


STT


B
TT
.TTTSSS
S



GGG
Template Predicted Secondary structure 













.









Template SS confidence 



























































   1........10.........20.........30.. .......40.........50.........
 
   166...170..
Predicted Secondary structure 






Query SS confidence 






Query Sequence  NSLEKHS
Query Conservation         
Alig confidence 






Template Conservation         
Template Sequence  DLMDPAK
Template Known Secondary structure 
SS
TTT
Template Predicted Secondary structure 






Template SS confidence 






   5960.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D