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Job DescriptionQ4JIM5
Confidence100.00%DateTue Jul 30 13:05:37 BST 2013
Rank194Aligned Residues251
% Identity24%Templatec2jedA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c theta; PDBTitle: the crystal structure of the kinase domain of the protein2 kinase c theta in complex with nvp-xaa228 at 2.32a3 resolution.
Resolution2.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   283......290.........300.........310.........320 .........330........
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Query Sequence  MERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTFK. . . . EDTMEVEEFLKEAAVMKE
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Template Sequence  LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL
Template Known Secondary structure 

GGGTTTTT

TT
TT
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   375....380.........390.........400.........410.........420.........430....
 
   339340.........350.........360.........370.........380.........390.......
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Query Sequence  . IKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSAM
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Template Sequence  AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK. . FDLSRATFYAAEIILGL
Template Known Secondary structure  GGGSTTB


SS



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BSS..

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   435....440.........450.........460.........470..... ....480.........490..
 
   398.400.........410.........420.........430.........440.........450.......
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Query Sequence  EYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL
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Template Sequence  QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE. FCGTPDYIAPEIL
Template Known Secondary structure  TT
B




GGG
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TT
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TT

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GGG

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   493......500.........510.........520.........530........ .540.........550.
 
   458.460.........470.........480.........490.........500.........510.......
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Query Sequence  AYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYEL
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Template Sequence  LGQKYNHSVDWWSFGVLLYEMLI. GQSPFHGQDEEELFHSIRMDN. PFYPRWLEKEAKDL
Template Known Secondary structure  TT

B
T.SS
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   552.......560.........570.... .....580.........590..... ....600.........
 
   518.520.........530... .....
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Query Sequence  MRACWKWSPADRPSFA. ETHQA
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Template Sequence  LVKLFVREPEKRLGVRGDIRQH
Template Known Secondary structure 

SSGGGSBTTBS
GGGS
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   610.........620.........630.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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