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Job DescriptionQ4JIM5
Confidence100.00%DateTue Jul 30 13:05:37 BST 2013
Rank210Aligned Residues233
% Identity23%Templatec2iwiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase pim-2; PDBTitle: crystal structure of the human pim2 in complex with a2 ruthenium organometallic ligand ru1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   289290.........300.........310.........320.... .....330.........340.....
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Query Sequence  TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTFKEDTM. . . EVEEFLKEAAVMKEIKHPNLV
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Template Sequence  RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLVTCPLEVALLWKVGAGGGHPGVI
Template Known Secondary structure  TT
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   33......40.........50.........60.........70.........80.........90..
 
   346...350.........360.........370.........380.........390.........400.....
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Query Sequence  QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSAMEYLEKKNF
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Template Sequence  RLLDWF. . . . FMLVLERPLPAQDLFDYITEKGP. . LGEGPSRCFFGQVVAAIQHCHSRGV
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   101..... ...110.........120......... 130.........140.........150....
 
   406...410......... 420.........430.........440.........450.........460.. .
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Query Sequence  IHRDLAARNCLVGE. NHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTF. S
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Template Sequence  VHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP. . . YTDFDGTRVYSPPEWISRHQYHA
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SGGGTTTT


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S
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   160.........170.........180.........190... ......200.........210......
 
   464.....470.........480.........490.........500.........510.........520...
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Query Sequence  IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWK
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Template Sequence  LPATVWSLGILLYDMVC. GDIPFERDQEILE. . . . . . . AELHFPAHVSPDCCALIRRCLA
Template Known Secondary structure  .SS
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   217..220.........230... ......240...... ...250.........260........
 
   524.....530........
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Query Sequence  WSPADRPSFAETHQA
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Template Sequence  PKPSSRPSLEEILLD
Template Known Secondary structure  SSTTTS

S
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   269270.........280...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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