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Job DescriptionQ4JIM5
Confidence100.00%DateTue Jul 30 13:05:37 BST 2013
Rank161Aligned Residues247
% Identity26%Templatec2i0eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase c-beta ii; PDBTitle: structure of catalytic domain of human protein kinase c2 beta ii complexed with a bisindolylmaleimide inhibitor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   286...290.........300.........310.........320..... ....330......... 340
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Query Sequence  TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTFKEDTME. . . . VEEFLKEAAVMKEI. K
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Template Sequence  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK
Template Known Secondary structure  TTTTTTSS
T
T
TT
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   340.........350.........360.........370.........380.........390.........
 
   341........350.........360.........370.........380.........390.........400
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Query Sequence  HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSAMEYL
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Template Sequence  PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR. . FKEPHAVFYAAEIAIGLFFL
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TTB

TT


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BTTSS..

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   400.........410.........420.........430....... ..440.........450.......
 
   401........410.........420.........430.........440.........450.........460
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Query Sequence  EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN
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Template Sequence  QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG. . VTTKFCGTPDYIAPEIIAYQ
Template Known Secondary structure  TT
B



SGGG
TTS



TT
B
S

TT..

B


S
TTT

TT
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   458.460.........470.........480.........490..... ....500.........510.....
 
   461........470.........480.........490.........500.........510.........520
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Query Sequence  TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRA
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Template Sequence  PYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEHN. VAYPKSMSKEAVAICKG
Template Known Secondary structure 
B
T.SS
SS

SS

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TTS
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   517..520.........530...... ...540.........550....... ..560.........570....
 
   521........530. .......
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Query Sequence  CWKWSPADRPS. . . . . FAETHQA
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Template Sequence  LMTKHPGKRLGCGPEGERDIKEH
Template Known Secondary structure  SS
SSGGGSTT
STTTS
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   575....580.........590.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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